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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001352964.2 → NP_001339893.1 DENN domain-containing protein 1A isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) represents the longest transcript and encodes the longest isoform (3).
- Source sequence(s)
-
AC006450, AL161790, AL390774, AL445489
- Consensus CDS
-
CCDS94479.1
- UniProtKB/TrEMBL
-
A0A0A0MS48
- Related
- ENSP00000377763.4, ENST00000394215.7
- Conserved Domains (4) summary
-
- smart00801
Location:305 → 371
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00799
Location:95 → 273
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- smart00800
Location:9 → 91
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
- cl26464
Location:705 → 1056
- Atrophin-1; Atrophin-1 family
-
NM_001352965.2 → NP_001339894.1 DENN domain-containing protein 1A isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC006450, AL161790, AL390774, AL445489
- UniProtKB/TrEMBL
-
Q9HCG4
- Conserved Domains (4) summary
-
- smart00801
Location:273 → 339
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00799
Location:63 → 241
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- smart00800
Location:10 → 59
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
- cl26464
Location:655 → 1006
- Atrophin-1; Atrophin-1 family
-
NM_001352966.2 → NP_001339895.1 DENN domain-containing protein 1A isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC006450, AL161790, AL390774, AL445489
- Conserved Domains (3) summary
-
- smart00801
Location:275 → 341
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00799
Location:65 → 243
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- smart00800
Location:14 → 61
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
-
NM_001352967.2 → NP_001339896.1 DENN domain-containing protein 1A isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC006450, AL161790, AL390774, AL445489
- Conserved Domains (3) summary
-
- smart00801
Location:273 → 339
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00799
Location:63 → 241
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- smart00800
Location:26 → 59
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
-
NM_001352968.2 → NP_001339897.1 DENN domain-containing protein 1A isoform 7
Status: VALIDATED
- Source sequence(s)
-
AC006450, AL161790, AL390774, AL445489
- Consensus CDS
-
CCDS87687.1
- Related
- ENSP00000362720.1, ENST00000373618.1
- Conserved Domains (3) summary
-
- smart00801
Location:273 → 339
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00799
Location:63 → 241
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- cl04085
Location:26 → 59
- uDENN; uDENN domain
-
NM_001393654.1 → NP_001380583.1 DENN domain-containing protein 1A isoform 8
Status: VALIDATED
- Source sequence(s)
-
AC006450, AL161790, AL390774, AL445489
- UniProtKB/TrEMBL
-
Q9HCG4
- Conserved Domains (4) summary
-
- smart00801
Location:305 → 371
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00799
Location:95 → 273
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- smart00800
Location:9 → 91
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
- PHA03247
Location:687 → 1038
- PHA03247; large tegument protein UL36; Provisional
-
NM_001400446.1 → NP_001387375.1 DENN domain-containing protein 1A isoform 9
Status: VALIDATED
- Source sequence(s)
-
AC006450, AL161790, AL390774, AL445489
-
NM_001400449.1 → NP_001387378.1 DENN domain-containing protein 1A isoform 10
Status: VALIDATED
- Source sequence(s)
-
AC006450, AL161790, AL390774, AL445489
- UniProtKB/TrEMBL
-
Q9HCG4
-
NM_020946.2 → NP_065997.1 DENN domain-containing protein 1A isoform 1
See identical proteins and their annotated locations for NP_065997.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes isoform 1.
- Source sequence(s)
-
AC006450, AL161790, AL390774, AL445489
- Consensus CDS
-
CCDS35133.1
- UniProtKB/Swiss-Prot
- A8MZA3, B1AM80, B7Z3C8, B7Z669, D3PFD3, Q05C88, Q5VWF0, Q6PJZ5, Q8IVD6, Q8TEH3, Q9H796
- UniProtKB/TrEMBL
-
Q9HCG4
- Related
- ENSP00000362727.2, ENST00000373624.6
- Conserved Domains (3) summary
-
- smart00801
Location:305 → 371
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00799
Location:95 → 273
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- smart00800
Location:9 → 91
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
-
NM_024820.3 → NP_079096.2 DENN domain-containing protein 1A isoform 2
See identical proteins and their annotated locations for NP_079096.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 3' UTR and coding region compared to variant 1, that causes a frameshift. The resulting isoform (2) is shorter and has a distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AL445489, BC009616, BC028061, BC039703
- Consensus CDS
-
CCDS35134.1
- UniProtKB/Swiss-Prot
-
Q8TEH3
- Related
- ENSP00000362722.3, ENST00000373620.7
- Conserved Domains (3) summary
-
- smart00801
Location:305 → 371
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00799
Location:95 → 273
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- smart00800
Location:9 → 91
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
RNA
-
NR_148208.2 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC006450, AL161790, AL390774, AL445489
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000009.12 Reference GRCh38.p14 Primary Assembly
- Range
-
123379658..123930126 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047423624.1 → XP_047279580.1 DENN domain-containing protein 1A isoform X18
- UniProtKB/TrEMBL
-
Q9HCG4
-
XM_047423622.1 → XP_047279578.1 DENN domain-containing protein 1A isoform X16
- UniProtKB/TrEMBL
-
Q9HCG4
-
XM_024447622.2 → XP_024303390.1 DENN domain-containing protein 1A isoform X9
- UniProtKB/TrEMBL
-
Q9HCG4
- Conserved Domains (4) summary
-
- smart00801
Location:275 → 341
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00799
Location:65 → 243
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- smart00800
Location:14 → 61
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
- cl26464
Location:675 → 1026
- Atrophin-1; Atrophin-1 family
-
XM_047423625.1 → XP_047279581.1 DENN domain-containing protein 1A isoform X19
- UniProtKB/TrEMBL
-
Q9HCG4
-
XM_047423623.1 → XP_047279579.1 DENN domain-containing protein 1A isoform X17
- UniProtKB/TrEMBL
-
Q9HCG4
-
XM_024447621.2 → XP_024303389.1 DENN domain-containing protein 1A isoform X10
- UniProtKB/TrEMBL
-
Q9HCG4
- Conserved Domains (4) summary
-
- smart00801
Location:273 → 339
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00799
Location:63 → 241
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- smart00800
Location:26 → 59
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
- cl26464
Location:673 → 1024
- Atrophin-1; Atrophin-1 family
-
XM_047423621.1 → XP_047279577.1 DENN domain-containing protein 1A isoform X15
-
XM_047423618.1 → XP_047279574.1 DENN domain-containing protein 1A isoform X11
-
XM_011518882.4 → XP_011517184.1 DENN domain-containing protein 1A isoform X2
- Conserved Domains (3) summary
-
- smart00801
Location:320 → 386
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00799
Location:110 → 288
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- smart00800
Location:24 → 106
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
-
XM_006717195.5 → XP_006717258.1 DENN domain-containing protein 1A isoform X5
- Conserved Domains (3) summary
-
- smart00801
Location:320 → 386
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00799
Location:110 → 288
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- smart00800
Location:24 → 106
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
-
XM_011518886.4 → XP_011517188.1 DENN domain-containing protein 1A isoform X8
- Conserved Domains (3) summary
-
- smart00801
Location:320 → 386
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00799
Location:110 → 288
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- smart00800
Location:24 → 106
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
-
XM_005252111.5 → XP_005252168.1 DENN domain-containing protein 1A isoform X13
- Conserved Domains (3) summary
-
- smart00801
Location:320 → 386
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00799
Location:110 → 288
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- smart00800
Location:24 → 106
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
-
XM_011518885.4 → XP_011517187.1 DENN domain-containing protein 1A isoform X6
- UniProtKB/TrEMBL
-
Q9HCG4
- Related
-
ENST00000473039.5
- Conserved Domains (3) summary
-
- smart00801
Location:284 → 350
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00799
Location:74 → 252
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- smart00800
Location:9 → 70
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
-
XM_047423615.1 → XP_047279571.1 DENN domain-containing protein 1A isoform X4
-
XM_047423613.1 → XP_047279569.1 DENN domain-containing protein 1A isoform X1
-
XM_047423620.1 → XP_047279576.1 DENN domain-containing protein 1A isoform X14
-
XM_047423614.1 → XP_047279570.1 DENN domain-containing protein 1A isoform X3
-
XM_047423616.1 → XP_047279572.1 DENN domain-containing protein 1A isoform X7
-
XM_047423619.1 → XP_047279575.1 DENN domain-containing protein 1A isoform X12
-
XM_024447623.2 → XP_024303391.1 DENN domain-containing protein 1A isoform X20
- UniProtKB/TrEMBL
-
Q9HCG4
- Conserved Domains (3) summary
-
- smart00801
Location:109 → 175
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00799
Location:4 → 77
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- cl26464
Location:509 → 860
- Atrophin-1; Atrophin-1 family
-
XM_047423630.1 → XP_047279586.1 DENN domain-containing protein 1A isoform X26
-
XM_047423631.1 → XP_047279587.1 DENN domain-containing protein 1A isoform X27
-
XM_047423627.1 → XP_047279583.1 DENN domain-containing protein 1A isoform X22
-
XM_005252113.6 → XP_005252170.1 DENN domain-containing protein 1A isoform X24
- Conserved Domains (3) summary
-
- smart00801
Location:320 → 386
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00799
Location:110 → 288
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- smart00800
Location:24 → 106
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
-
XM_047423626.1 → XP_047279582.1 DENN domain-containing protein 1A isoform X21
-
XM_047423629.1 → XP_047279585.1 DENN domain-containing protein 1A isoform X25
-
XM_047423628.1 → XP_047279584.1 DENN domain-containing protein 1A isoform X23
-
XM_047423633.1 → XP_047279589.1 DENN domain-containing protein 1A isoform X29
-
XM_047423632.1 → XP_047279588.1 DENN domain-containing protein 1A isoform X28
RNA
-
XR_007061334.1 RNA Sequence
-
XR_007061335.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060933.1 Alternate T2T-CHM13v2.0
- Range
-
135577391..136128012 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054363366.1 → XP_054219341.1 DENN domain-containing protein 1A isoform X18
- UniProtKB/TrEMBL
-
Q9HCG4
-
XM_054363364.1 → XP_054219339.1 DENN domain-containing protein 1A isoform X16
- UniProtKB/TrEMBL
-
Q9HCG4
-
XM_054363357.1 → XP_054219332.1 DENN domain-containing protein 1A isoform X9
- UniProtKB/TrEMBL
-
Q9HCG4
-
XM_054363367.1 → XP_054219342.1 DENN domain-containing protein 1A isoform X19
- UniProtKB/TrEMBL
-
Q9HCG4
-
XM_054363365.1 → XP_054219340.1 DENN domain-containing protein 1A isoform X17
- UniProtKB/TrEMBL
-
Q9HCG4
-
XM_054363358.1 → XP_054219333.1 DENN domain-containing protein 1A isoform X10
- UniProtKB/TrEMBL
-
Q9HCG4
-
XM_054363363.1 → XP_054219338.1 DENN domain-containing protein 1A isoform X15
-
XM_054363359.1 → XP_054219334.1 DENN domain-containing protein 1A isoform X11
-
XM_054363350.1 → XP_054219325.1 DENN domain-containing protein 1A isoform X2
-
XM_054363353.1 → XP_054219328.1 DENN domain-containing protein 1A isoform X5
-
XM_054363356.1 → XP_054219331.1 DENN domain-containing protein 1A isoform X8
-
XM_054363361.1 → XP_054219336.1 DENN domain-containing protein 1A isoform X13
-
XM_054363354.1 → XP_054219329.1 DENN domain-containing protein 1A isoform X6
- UniProtKB/TrEMBL
-
Q9HCG4
-
XM_054363352.1 → XP_054219327.1 DENN domain-containing protein 1A isoform X4
-
XM_054363349.1 → XP_054219324.1 DENN domain-containing protein 1A isoform X1
-
XM_054363362.1 → XP_054219337.1 DENN domain-containing protein 1A isoform X14
-
XM_054363351.1 → XP_054219326.1 DENN domain-containing protein 1A isoform X3
-
XM_054363355.1 → XP_054219330.1 DENN domain-containing protein 1A isoform X7
-
XM_054363360.1 → XP_054219335.1 DENN domain-containing protein 1A isoform X12
-
XM_054363372.1 → XP_054219347.1 DENN domain-containing protein 1A isoform X26
-
XM_054363373.1 → XP_054219348.1 DENN domain-containing protein 1A isoform X27
-
XM_054363368.1 → XP_054219343.1 DENN domain-containing protein 1A isoform X22
-
XM_054363370.1 → XP_054219345.1 DENN domain-containing protein 1A isoform X24
-
XM_054363371.1 → XP_054219346.1 DENN domain-containing protein 1A isoform X25
-
XM_054363369.1 → XP_054219344.1 DENN domain-containing protein 1A isoform X23
-
XM_054363375.1 → XP_054219350.1 DENN domain-containing protein 1A isoform X29
-
XM_054363374.1 → XP_054219349.1 DENN domain-containing protein 1A isoform X28
RNA
-
XR_008488053.1 RNA Sequence