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    SULT1C2 sulfotransferase family 1C member 2 [ Homo sapiens (human) ]

    Gene ID: 6819, updated on 9-Dec-2024

    Summary

    Official Symbol
    SULT1C2provided by HGNC
    Official Full Name
    sulfotransferase family 1C member 2provided by HGNC
    Primary source
    HGNC:HGNC:11456
    See related
    Ensembl:ENSG00000198203 MIM:602385; AllianceGenome:HGNC:11456
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ST1C1; ST1C2; SULT1C1; humSULTC2
    Summary
    Sulfotransferase enzymes catalyze the sulfate conjugation of many hormones, neurotransmitters, drugs, and xenobiotic compounds. These cytosolic enzymes are different in their tissue distributions and substrate specificities. The gene structure (number and length of exons) is similar among family members. This gene encodes a protein that belongs to the SULT1 subfamily, responsible for transferring a sulfo moiety from PAPS to phenol-containing compounds. Two alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Jul 2008]
    Expression
    Biased expression in stomach (RPKM 61.8), kidney (RPKM 26.2) and 3 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See SULT1C2 in Genome Data Viewer
    Location:
    2q12.3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (108288895..108309915)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (108749770..108770814)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (108905351..108926371)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene sulfotransferase family 1C member 3 Neighboring gene WASF1 pseudogene 1 Neighboring gene sulfotransferase family, cytosolic, 1C, member 2 pseudogene 2 Neighboring gene sulfotransferase family 1C member 5, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16341

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables aryl sulfotransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables aryl sulfotransferase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables sulfotransferase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in amine metabolic process TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in sulfation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within sulfation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in sulfation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytosol TAS
    Traceable Author Statement
    more info
     
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    sulfotransferase 1C2
    Names
    SULT1C#1
    sulfotransferase 1C1
    sulfotransferase family, cytosolic, 1C, member 1
    sulfotransferase family, cytosolic, 1C, member 2
    NP_001047.1
    NP_789795.1
    XP_005264070.1
    XP_054199546.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001056.4NP_001047.1  sulfotransferase 1C2 isoform a

      See identical proteins and their annotated locations for NP_001047.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) is the predominant transcript and it encodes isoform a.
      Source sequence(s)
      AA856596, AC019100, AF186252
      Consensus CDS
      CCDS2075.1
      UniProtKB/Swiss-Prot
      B2R813, O00338, Q53SG4
      UniProtKB/TrEMBL
      B4DLP0
      Related
      ENSP00000251481.6, ENST00000251481.11
      Conserved Domains (1) summary
      pfam00685
      Location:39288
      Sulfotransfer_1; Sulfotransferase domain
    2. NM_176825.3NP_789795.1  sulfotransferase 1C2 isoform b

      See identical proteins and their annotated locations for NP_789795.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) contains one alternate in-frame segment and uses a different splice site in an adjacent exon when compared to variant 1. The resulting isoform (b) is longer with a different internal protein sequence when compared to isoform a.
      Source sequence(s)
      AA856596, AC019100, AF186255
      Consensus CDS
      CCDS2076.1
      UniProtKB/TrEMBL
      B4DLP0
      Related
      ENSP00000319622.5, ENST00000326853.9
      Conserved Domains (1) summary
      pfam00685
      Location:39299
      Sulfotransfer_1; Sulfotransferase domain

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      108288895..108309915
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005264013.5XP_005264070.1  sulfotransferase 1C2 isoform X1

      UniProtKB/TrEMBL
      B4DLP0
      Conserved Domains (1) summary
      pfam00685
      Location:39290
      Sulfotransfer_1; Sulfotransferase domain

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      108749770..108770814
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054343571.1XP_054199546.1  sulfotransferase 1C2 isoform X1

      UniProtKB/TrEMBL
      B4DLP0