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    Ulbp3 UL16 binding protein 3 [ Mus musculus (house mouse) ]

    Gene ID: 215728, updated on 8-Feb-2024

    Summary

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    Official Symbol
    Ulbp3provided by MGI
    Official Full Name
    UL16 binding protein 3provided by MGI
    Primary source
    MGI:MGI:3588256
    See related
    Ensembl:ENSMUSG00000071434 AllianceGenome:MGI:3588256
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    9230019H11Rik
    Summary
    Predicted to enable natural killer cell lectin-like receptor binding activity. Predicted to be involved in natural killer cell activation and natural killer cell mediated cytotoxicity. Predicted to be anchored component of plasma membrane. Orthologous to human ULBP3 (UL16 binding protein 3). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Restricted expression toward genital fat pad adult (RPKM 1.6) See more
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    Genomic context

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    See Ulbp3 in Genome Data Viewer
    Location:
    10 A1; 10 2.17 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (3069841..3079546)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (3119841..3129546)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 30674 Neighboring gene RIKEN cDNA B020014A21 gene Neighboring gene hyaluronic acid binding protein 4 pseudogene Neighboring gene STARR-seq mESC enhancer starr_25681 Neighboring gene copine III pseudogene Neighboring gene STARR-seq mESC enhancer starr_25680 Neighboring gene STARR-seq mESC enhancer starr_25679 Neighboring gene STARR-seq mESC enhancer starr_25678 Neighboring gene STARR-seq mESC enhancer starr_25677 Neighboring gene predicted gene, 51789

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
    5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables natural killer cell lectin-like receptor binding ISO
    Inferred from Sequence Orthology
    more info
    		  
    Process Evidence Code Pubs
    involved_in natural killer cell activation ISO
    Inferred from Sequence Orthology
    more info
    		  
    involved_in natural killer cell mediated cytotoxicity ISO
    Inferred from Sequence Orthology
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein LOC215728

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033977.2 → NP_001029149.1  uncharacterized protein LOC215728 precursor

      Status: VALIDATED

      Source sequence(s)
      AC168222, AK136660
      UniProtKB/TrEMBL
      Q3UW27
      Related
      ENSMUST00000095874.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      3069841..3079546
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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