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    LOC4343425 WAT1-related protein At5g64700 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4343425, updated on 13-Jul-2024

    Summary

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    Gene symbol
    LOC4343425
    Gene description
    WAT1-related protein At5g64700
    Locus tag
    OSNPB_070524900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    P0678G09.6
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    Genomic context

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    See LOC4343425 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (20592892..20595079, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (20365661..20367861, complement)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107277229 Neighboring gene uncharacterized LOC136357442 Neighboring gene WAT1-related protein At5g64700 Neighboring gene rab GTPase-activating protein 22

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    WAT1-related protein At5g64700
    Names
    OSJNBb0052O11.114
    Os07g0524900
    putative MtN21

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      20592892..20595079 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015790041.3 → XP_015645527.1  WAT1-related protein At5g64700

      UniProtKB/TrEMBL
      A2YM04, Q0D5Y6, Q69SA4, Q69UC2
      Conserved Domains (1) summary
      PLN00411
      Location:19 → 329
      PLN00411; nodulin MtN21 family protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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