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    LOC4340904 probable inorganic phosphate transporter 1-9 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4340904, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4340904
    Gene description
    probable inorganic phosphate transporter 1-9
    Locus tag
    OSNPB_060324800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    PT9; OsPT9; PHT1-9; OsJ_21168
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    Genomic context

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    See LOC4340904 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (12863626..12866257)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (12679325..12681857)

    Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene protein LE25 Neighboring gene transfer RNA glutamine (anticodon CUG) Neighboring gene probable inorganic phosphate transporter 1-9 Neighboring gene probable inorganic phosphate transporter 1-10

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable inorganic phosphate transporter 1-9
    Names
    H(+)/Pi cotransporter
    LOC_Os06g21920
    putative phosphate transporter OsPT9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

      Range
      12863626..12866257
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015787163.3 → XP_015642649.1  probable inorganic phosphate transporter 1-9

      UniProtKB/Swiss-Prot
      A3BB87, Q0DCI6, Q8H6G7
      UniProtKB/TrEMBL
      A2YCC8
      Conserved Domains (1) summary
      TIGR00887
      Location:7 → 521
      2A0109; phosphate:H+ symporter
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8H6G7.2 GenPept UniProtKB/Swiss-Prot:Q8H6G7

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