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    LOC4340530 FCS-Like Zinc finger 6 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4340530, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4340530
    Gene description
    FCS-Like Zinc finger 6
    Locus tag
    OSNPB_060223700
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4340530 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (6563549..6565395, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (6395398..6397246, complement)

    Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1-like Neighboring gene agamous-like MADS-box protein AGL66 Neighboring gene protein CELLULOSE SYNTHASE INTERACTIVE 1 Neighboring gene membrane-anchored ubiquitin-fold protein 2-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    FCS-Like Zinc finger 6
    Names
    Os06g0223700
    P0638H11.19

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

      Range
      6563549..6565395 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015785940.3 → XP_015641426.1  FCS-Like Zinc finger 6

      UniProtKB/TrEMBL
      A3B9T3, Q67UI7
      Conserved Domains (1) summary
      pfam04570
      Location:64 → 115
      zf-FLZ; zinc-finger of the FCS-type, C2-C2
    Nucleotide Protein
    Heading Accession and Version

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