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    LOC4326920 mitogen-activated protein kinase kinase kinase 17 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4326920, updated on 17-Jul-2024

    Summary

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    Gene symbol
    LOC4326920
    Gene description
    mitogen-activated protein kinase kinase kinase 17
    Locus tag
    OSNPB_010699600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    NPKL4
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (29534655..29536254, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (28946550..28948064, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase kinase kinase 18 Neighboring gene mitogen-activated protein kinase kinase kinase 17 Neighboring gene membrane protein PM19L-like Neighboring gene uncharacterized LOC112937665

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mitogen-activated protein kinase kinase kinase 17
    Names
    Os01g0699600

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      29534655..29536254 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015783536.3 → XP_015639022.1  mitogen-activated protein kinase kinase kinase 17

      UniProtKB/TrEMBL
      B9EZ05
      Conserved Domains (2) summary
      smart00220
      Location:12 → 260
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cd06606
      Location:10 → 260
      STKc_MAPKKK; Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase
    Nucleotide Protein
    Heading Accession and Version

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