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    LOC4344410 ENHANCER OF AG-4 protein 2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4344410, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4344410
    Gene description
    ENHANCER OF AG-4 protein 2
    Locus tag
    OSNPB_080100500
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4344410 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (40685..50668)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (36011..46171)

    Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112939836 Neighboring gene zinc transporter ZTP29 Neighboring gene probable E3 ubiquitin ligase SUD1 Neighboring gene uncharacterized LOC4344411 Neighboring gene branchpoint-bridging protein Neighboring gene uncharacterized LOC4344413

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    ENHANCER OF AG-4 protein 2
    Names
    B1147B12.7-1
    B1147B12.7-2
    Os08g0100500
    PWWP domain protein-like
    putative PWWP domain protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

      Range
      40685..50668
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026019946.2 → XP_025875731.1  ENHANCER OF AG-4 protein 2

      UniProtKB/TrEMBL
      B8B9X3, Q0J8P8, Q6Z1Z8
      Conserved Domains (2) summary
      cd05834
      Location:16 → 109
      HDGF_related; The PWWP domain is an essential part of the Hepatoma Derived Growth Factor (HDGF) family of proteins, and is necessary for DNA binding by HDGF. This family of endogenous nuclear-targeted mitogens includes HRP (HDGF-related proteins 1, 2, 3, 4, or HPR1, ...
      cl02544
      Location:829 → 955
      VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily

    2. XM_015794181.3 → XP_015649667.1  ENHANCER OF AG-4 protein 2

      UniProtKB/TrEMBL
      B8B9X3, Q0J8P8, Q6Z1Z8
      Conserved Domains (2) summary
      cd05834
      Location:16 → 109
      HDGF_related; The PWWP domain is an essential part of the Hepatoma Derived Growth Factor (HDGF) family of proteins, and is necessary for DNA binding by HDGF. This family of endogenous nuclear-targeted mitogens includes HRP (HDGF-related proteins 1, 2, 3, 4, or HPR1, ...
      cl02544
      Location:829 → 955
      VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily
    Nucleotide Protein
    Heading Accession and Version

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