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    LOC4331499 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4331499, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4331499
    Gene description
    NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
    Locus tag
    OSNPB_030129900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4331499 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (1693377..1697350, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (1685514..1689535, complement)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein At4g15970 Neighboring gene uncharacterized LOC4331496 Neighboring gene uncharacterized LOC4331498 Neighboring gene small nucleolar RNA Z103 Neighboring gene small nucleolar RNA Z103

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
    Names
    Os03g0129900

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      1693377..1697350 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015772502.3 → XP_015627988.1  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7

      UniProtKB/TrEMBL
      A0A8J8YQU3, A2XC22, A3ADR9, Q8H879
      Conserved Domains (1) summary
      pfam05676
      Location:19 → 77
      NDUF_B7; NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7)
    Nucleotide Protein
    Heading Accession and Version

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