U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Mir142 microRNA 142 [ Mus musculus (house mouse) ]

    Gene ID: 387160, updated on 2-Nov-2024

    Summary

    Official Symbol
    Mir142provided by MGI
    Official Full Name
    microRNA 142provided by MGI
    Primary source
    MGI:MGI:2676827
    See related
    Ensembl:ENSMUSG00000105196 miRBase:MI0000167; AllianceGenome:MGI:2676827
    Gene type
    ncRNA
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Mirn142; miR-142; mir-142a; mmu-mir-142; mmu-mir-142a
    Summary
    microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Mir142 in Genome Data Viewer
    Location:
    11 C; 11 52.21 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (87647690..87647753)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (87756864..87756927)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene ring finger protein 43 Neighboring gene RIKEN cDNA 1110028F11 gene Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:87534506-87534735 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:87539623-87539928 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:87547776-87547885 Neighboring gene STARR-positive B cell enhancer ABC_E7039 Neighboring gene STARR-positive B cell enhancer ABC_E1838 Neighboring gene SPT4A, DSIF elongation factor subunit Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:87563093-87563276 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:87565164-87565417 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:87568144-87568342 Neighboring gene STARR-positive B cell enhancer ABC_E8440 Neighboring gene microRNA 142b Neighboring gene TSPO associated protein 1 Neighboring gene STARR-positive B cell enhancer ABC_E7040 Neighboring gene Mpo distal enhancer region Neighboring gene Mpo proximal enhancer and promoter region Neighboring gene myeloperoxidase

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (8)  1 citation

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_029555.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AL604022
      Related
      ENSMUST00000198092.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      87647690..87647753
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)