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    LOC4349619 uncharacterized LOC4349619 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4349619, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC4349619
    Gene description
    uncharacterized LOC4349619
    Locus tag
    OSNPB_110118600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4349619 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 11 NC_089045.1 (880905..883437, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 11 NC_029266.1 (837319..839904, complement)

    Chromosome 11 - NC_089045.1Genomic Context describing neighboring genes Neighboring gene root phototropism protein 2 Neighboring gene U2 spliceosomal RNA Neighboring gene BTB/POZ domain-containing protein At3g08570 Neighboring gene uncharacterized LOC4349620 Neighboring gene uncharacterized LOC4349621

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4349619
    Names
    Os11g0118600

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089045.1 Reference ASM3414082v1 Primary Assembly

      Range
      880905..883437 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066305461.1 → XP_066161558.1  uncharacterized protein LOC4349619

      UniProtKB/TrEMBL
      A0A0N7KTH4, A0A5S6R9A1, A2ZAV1, A3C813, Q0IQJ2, Q2QYI6

    2. XM_026021648.2 → XP_025877433.1  uncharacterized protein LOC4349619

      UniProtKB/TrEMBL
      A0A0N7KTH4, A0A5S6R9A1, A2ZAV1, A3C813, Q0IQJ2, Q2QYI6
      Conserved Domains (1) summary
      pfam06697
      Location:25 → 207
      DUF1191; Protein of unknown function (DUF1191)
    Nucleotide Protein
    Heading Accession and Version

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