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    LOC4337635 UPF0014 membrane protein STAR2-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4337635, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4337635
    Gene description
    UPF0014 membrane protein STAR2-like
    Locus tag
    OSNPB_050119000
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    STAR2
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    Genomic context

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    See LOC4337635 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (1001895..1003309)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (989403..990803)

    Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene protein ALP1-like Neighboring gene uncharacterized LOC107275367 Neighboring gene putative WUSCHEL-related homeobox 2 Neighboring gene uncharacterized LOC112939043 Neighboring gene uncharacterized LOC4337636 Neighboring gene uncharacterized LOC4337637

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A bacterial-type ABC transporter is involved in aluminum tolerance in rice. Huang CF, et al. Plant Cell, 2009 Feb. PMID 19244140, Free PMC Article
    2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    General protein information

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    Preferred Names
    uPF0014 membrane protein STAR2
    Names
    LOC_Os05g02750
    P0496H07.22
    Protein SENSITIVE TO ALUMINUM RHIZOTOXICITY 2
    UPF0014 membrane protein STAR2
    putative ABC transporter

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001402477.1 → NP_001389406.1  uPF0014 membrane protein STAR2

      Status: VALIDATED

      Source sequence(s)
      AK069359, CI144724, CI177122, CI186929

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

      Range
      1001895..1003309
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5W7C1.1 GenPept UniProtKB/Swiss-Prot:Q5W7C1

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