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    TAC1 Protein TILLER ANGLE CONTROL 1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4347655, updated on 1-Aug-2024

    Summary

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    Gene symbol
    TAC1
    Gene description
    Protein TILLER ANGLE CONTROL 1
    Locus tag
    OSNPB_090529300
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OsJ_30092
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    Genomic context

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    See TAC1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (25175201..25178831, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (20731590..20736823, complement)

    Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene probable 6-phosphogluconolactonase 4, chloroplastic Neighboring gene uncharacterized LOC136351775 Neighboring gene uncharacterized LOC107277799 Neighboring gene uncharacterized LOC4347656 Neighboring gene uncharacterized LOC136351776

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in morphogenesis of a branching structure IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein TILLER ANGLE CONTROL 1
    Names
    LOC_Os09g35980
    Os09g0529300

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001422915.1 → NP_001409844.1  protein TILLER ANGLE CONTROL 1

      Status: VALIDATED

      Source sequence(s)
      AP014965

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

      Range
      25175201..25178831 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066303898.1 → XP_066159995.1  protein TILLER ANGLE CONTROL 1 isoform X4

      UniProtKB/Swiss-Prot
      B7EBP2, B9G4P4, Q0J059, Q66V57

    2. XM_066303897.1 → XP_066159994.1  protein TILLER ANGLE CONTROL 1 isoform X4

      UniProtKB/Swiss-Prot
      B7EBP2, B9G4P4, Q0J059, Q66V57

    3. XM_026020405.2 → XP_025876190.1  protein TILLER ANGLE CONTROL 1 isoform X3

    4. XM_026020404.2 → XP_025876189.1  protein TILLER ANGLE CONTROL 1 isoform X2

    5. XM_066303894.1 → XP_066159991.1  protein TILLER ANGLE CONTROL 1 isoform X1

    6. XM_066303895.1 → XP_066159992.1  protein TILLER ANGLE CONTROL 1 isoform X1

    7. XM_066303896.1 → XP_066159993.1  protein TILLER ANGLE CONTROL 1 isoform X1

    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0J059.2 GenPept UniProtKB/Swiss-Prot:Q0J059

    Gene LinkOut

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