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    DSCAM DS cell adhesion molecule [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 722556, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DSCAMprovided by VGNC
    Official Full Name
    DS cell adhesion moleculeprovided by VGNC
    Primary source
    VGNC:VGNC:72000
    See related
    Ensembl:ENSMMUG00000005174
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See DSCAM in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    34
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (5805428..6629451)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (5837947..6694216)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114676701 Neighboring gene beta-secretase 2 Neighboring gene small nucleolar RNA SNORA51 Neighboring gene uncharacterized LOC114676801 Neighboring gene Purkinje cell protein 4 Neighboring gene immunoglobulin superfamily member 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cell-cell adhesion mediator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in dendrite self-avoidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Down syndrome cell adhesion molecule

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      5805428..6629451
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028845317.1 → XP_028701150.1  Down syndrome cell adhesion molecule isoform X1

      UniProtKB/TrEMBL
      A0A5F8AP79
      Related
      ENSMMUP00000079186.1, ENSMMUT00000094744.1
      Conserved Domains (7) summary
      cd05734
      Location:707 → 784
      Ig_DSCAM; Immunoglobulin (Ig)-like domain of Down Syndrome Cell Adhesion molecule (DSCAM)
      smart00408
      Location:518 → 575
      IGc2; Immunoglobulin C-2 Type
      cd00063
      Location:1380 → 1470
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd00096
      Location:613 → 680
      Ig; Immunoglobulin domain
      pfam07679
      Location:235 → 310
      I-set; Immunoglobulin I-set domain
      pfam13927
      Location:1301 → 1363
      Ig_3; Immunoglobulin domain
      cl11960
      Location:802 → 889
      Ig; Immunoglobulin domain

    2. XM_028845318.1 → XP_028701151.1  Down syndrome cell adhesion molecule isoform X2

      UniProtKB/TrEMBL
      F7CZ98
      Related
      ENSMMUP00000006849.4, ENSMMUT00000007290.4
      Conserved Domains (7) summary
      cd05734
      Location:572 → 649
      Ig_DSCAM; Immunoglobulin (Ig)-like domain of Down Syndrome Cell Adhesion molecule (DSCAM)
      smart00408
      Location:383 → 440
      IGc2; Immunoglobulin C-2 Type
      cd00063
      Location:1245 → 1335
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd00096
      Location:478 → 545
      Ig; Immunoglobulin domain
      pfam07679
      Location:100 → 175
      I-set; Immunoglobulin I-set domain
      pfam13927
      Location:272 → 353
      Ig_3; Immunoglobulin domain
      cl11960
      Location:667 → 754
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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