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    TPM1 tropomyosin 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 705236, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TPM1provided by VGNC
    Official Full Name
    tropomyosin 1provided by VGNC
    Primary source
    VGNC:VGNC:78634
    See related
    Ensembl:ENSMMUG00000001587
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TPM1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (39499248..39528591)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (39639143..39668434)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene talin 2 Neighboring gene microRNA mir-190a Neighboring gene nuclease-sensitive element-binding protein 1-like Neighboring gene uncharacterized LOC106999209 Neighboring gene lactamase beta

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cardiac muscle contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tropomyosin alpha-1 chain
    Names
    tropomyosin 1 (alpha)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      39499248..39528591
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015142418.2 → XP_014997904.1  tropomyosin alpha-1 chain isoform X14

      UniProtKB/TrEMBL
      F7GV63
      Related
      ENSMMUP00000002121.3, ENSMMUT00000002245.4
      Conserved Domains (1) summary
      pfam00261
      Location:48 → 280
      Tropomyosin

    2. XM_001103298.4 → XP_001103298.1  tropomyosin alpha-1 chain isoform X23

      See identical proteins and their annotated locations for XP_001103298.1

      UniProtKB/TrEMBL
      F7GV63
      Conserved Domains (1) summary
      pfam00261
      Location:90 → 324
      Tropomyosin

    3. XM_001104220.4 → XP_001104220.1  tropomyosin alpha-1 chain isoform X13

      See identical proteins and their annotated locations for XP_001104220.1

      UniProtKB/TrEMBL
      I0FUQ5
      Conserved Domains (1) summary
      pfam00261
      Location:48 → 282
      Tropomyosin

    4. XM_001104136.4 → XP_001104136.1  tropomyosin alpha-1 chain isoform X10

      See identical proteins and their annotated locations for XP_001104136.1

      UniProtKB/TrEMBL
      I2CXK5
      Conserved Domains (1) summary
      pfam00261
      Location:48 → 282
      Tropomyosin

    5. XM_015142417.2 → XP_014997903.1  tropomyosin alpha-1 chain isoform X12

      UniProtKB/TrEMBL
      F7GV59
      Conserved Domains (1) summary
      pfam00261
      Location:48 → 282
      Tropomyosin

    6. XM_001104296.4 → XP_001104296.1  tropomyosin alpha-1 chain isoform X7

      See identical proteins and their annotated locations for XP_001104296.1

      UniProtKB/TrEMBL
      I2CXK4
      Conserved Domains (1) summary
      pfam00261
      Location:48 → 282
      Tropomyosin

    7. XM_028851010.1 → XP_028706843.1  tropomyosin alpha-1 chain isoform X4

      Conserved Domains (1) summary
      pfam00261
      Location:48 → 259
      Tropomyosin

    8. XM_001102437.4 → XP_001102437.2  tropomyosin alpha-1 chain isoform X8

      Conserved Domains (1) summary
      pfam00261
      Location:48 → 282
      Tropomyosin

    9. XM_028851008.1 → XP_028706841.1  tropomyosin alpha-1 chain isoform X2

      Conserved Domains (1) summary
      pfam00261
      Location:48 → 259
      Tropomyosin

    10. XM_015142415.2 → XP_014997901.1  tropomyosin alpha-1 chain isoform X11

      Conserved Domains (1) summary
      pfam00261
      Location:48 → 282
      Tropomyosin

    11. XM_015142414.2 → XP_014997900.1  tropomyosin alpha-1 chain isoform X9

      Conserved Domains (1) summary
      pfam00261
      Location:48 → 282
      Tropomyosin

    12. XM_028851009.1 → XP_028706842.1  tropomyosin alpha-1 chain isoform X3

      Conserved Domains (1) summary
      pfam00261
      Location:48 → 259
      Tropomyosin

    13. XM_028851011.1 → XP_028706844.1  tropomyosin alpha-1 chain isoform X6

      Conserved Domains (1) summary
      pfam00261
      Location:48 → 282
      Tropomyosin

    14. XM_001103963.4 → XP_001103963.1  tropomyosin alpha-1 chain isoform X5

      See identical proteins and their annotated locations for XP_001103963.1

      UniProtKB/TrEMBL
      A0A1D5R2J4
      Conserved Domains (1) summary
      pfam00261
      Location:48 → 282
      Tropomyosin

    15. XM_028851007.1 → XP_028706840.1  tropomyosin alpha-1 chain isoform X1

      UniProtKB/TrEMBL
      F6RBE9
      Related
      ENSMMUP00000001059.3, ENSMMUT00000001130.4
      Conserved Domains (1) summary
      pfam00261
      Location:48 → 259
      Tropomyosin

    16. XM_002804802.3 → XP_002804848.1  tropomyosin alpha-1 chain isoform X22

      See identical proteins and their annotated locations for XP_002804848.1

      UniProtKB/TrEMBL
      A0A5K1UZR5
      Conserved Domains (1) summary
      pfam00261
      Location:12 → 244
      Tropomyosin

    17. XM_002804803.3 → XP_002804849.1  tropomyosin alpha-1 chain isoform X20

      See identical proteins and their annotated locations for XP_002804849.1

      UniProtKB/TrEMBL
      A0A1D5R4G5
      Conserved Domains (1) summary
      pfam00261
      Location:12 → 246
      Tropomyosin

    18. XM_015142419.2 → XP_014997905.1  tropomyosin alpha-1 chain isoform X17

      UniProtKB/TrEMBL
      H9F3B5
      Conserved Domains (1) summary
      pfam00261
      Location:12 → 246
      Tropomyosin

    19. XM_002804800.3 → XP_002804846.1  tropomyosin alpha-1 chain isoform X21

      See identical proteins and their annotated locations for XP_002804846.1

      UniProtKB/TrEMBL
      A0A1D5R4G5, H9ELS7
      Related
      ENSMMUP00000055201.2, ENSMMUT00000073823.2
      Conserved Domains (1) summary
      pfam00261
      Location:12 → 244
      Tropomyosin

    20. XM_002804801.3 → XP_002804847.1  tropomyosin alpha-1 chain isoform X18

      See identical proteins and their annotated locations for XP_002804847.1

      Conserved Domains (1) summary
      pfam00261
      Location:12 → 246
      Tropomyosin

    21. XM_015142421.2 → XP_014997907.1  tropomyosin alpha-1 chain isoform X19

      Conserved Domains (1) summary
      pfam00261
      Location:12 → 246
      Tropomyosin

    22. XM_028851013.1 → XP_028706846.1  tropomyosin alpha-1 chain isoform X16

      Related
      ENSMMUP00000033526.3, ENSMMUT00000040465.3
      Conserved Domains (1) summary
      pfam00261
      Location:12 → 223
      Tropomyosin

    23. XM_028851012.1 → XP_028706845.1  tropomyosin alpha-1 chain isoform X15

      UniProtKB/TrEMBL
      F7GV58, H9FZ57
      Related
      ENSMMUP00000002124.4, ENSMMUT00000002248.4
      Conserved Domains (1) summary
      pfam00261
      Location:12 → 223
      Tropomyosin
    Nucleotide Protein
    Heading Accession and Version

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