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    PHACTR1 phosphatase and actin regulator 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700226, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PHACTR1provided by VGNC
    Official Full Name
    phosphatase and actin regulator 1provided by VGNC
    Primary source
    VGNC:VGNC:75841
    See related
    Ensembl:ENSMMUG00000020040
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PHACTR1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (156706706..157286362, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (12939364..13520938)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene Gfo/Idh/MocA-like oxidoreductase domain containing 1 Neighboring gene uncharacterized LOC106997802 Neighboring gene TBC1 domain family member 7 Neighboring gene uncharacterized LOC106997803 Neighboring gene U1 spliceosomal RNA Neighboring gene uncharacterized LOC106997801 Neighboring gene uncharacterized LOC106997805 Neighboring gene uncharacterized LOC114677704 Neighboring gene uncharacterized LOC114677705 Neighboring gene uncharacterized LOC106997800

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell motility IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in stress fiber assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphatase and actin regulator 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001260596.1 → NP_001247525.1  phosphatase and actin regulator 1

      See identical proteins and their annotated locations for NP_001247525.1

      Status: PROVISIONAL

      Source sequence(s)
      JU333408
      UniProtKB/TrEMBL
      F7GDH6, G7MQR3, H9FRA4
      Related
      ENSMMUP00000026359.3, ENSMMUT00000028173.4
      Conserved Domains (2) summary
      smart00707
      Location:461 → 485
      RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
      pfam02755
      Location:140 → 161
      RPEL; RPEL repeat

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      156706706..157286362 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028846697.1 → XP_028702530.1  phosphatase and actin regulator 1 isoform X3

      UniProtKB/TrEMBL
      F7GDH6, G7MQR3, H9FRA4
      Conserved Domains (2) summary
      smart00707
      Location:461 → 485
      RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
      pfam02755
      Location:140 → 161
      RPEL; RPEL repeat

    2. XM_015135546.2 → XP_014991032.1  phosphatase and actin regulator 1 isoform X3

      UniProtKB/TrEMBL
      F7GDH6, G7MQR3, H9FRA4
      Conserved Domains (2) summary
      smart00707
      Location:461 → 485
      RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
      pfam02755
      Location:140 → 161
      RPEL; RPEL repeat

    3. XM_015135544.2 → XP_014991030.1  phosphatase and actin regulator 1 isoform X3

      UniProtKB/TrEMBL
      F7GDH6, G7MQR3, H9FRA4
      Conserved Domains (2) summary
      smart00707
      Location:461 → 485
      RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
      pfam02755
      Location:140 → 161
      RPEL; RPEL repeat

    4. XM_015135539.2 → XP_014991025.1  phosphatase and actin regulator 1 isoform X2

      Conserved Domains (2) summary
      smart00707
      Location:530 → 554
      RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
      pfam02755
      Location:140 → 161
      RPEL; RPEL repeat

    5. XM_028846698.1 → XP_028702531.1  phosphatase and actin regulator 1 isoform X3

      UniProtKB/TrEMBL
      F7GDH6, G7MQR3, H9FRA4
      Conserved Domains (2) summary
      smart00707
      Location:461 → 485
      RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
      pfam02755
      Location:140 → 161
      RPEL; RPEL repeat

    6. XM_028846699.1 → XP_028702532.1  phosphatase and actin regulator 1 isoform X5

      UniProtKB/TrEMBL
      G7MQR3
      Related
      ENSMMUP00000075931.1, ENSMMUT00000087794.1
      Conserved Domains (3) summary
      smart00707
      Location:369 → 393
      RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
      pfam02755
      Location:48 → 69
      RPEL; RPEL repeat
      cl29414
      Location:330 → 354
      RPEL; RPEL repeat

    7. XM_015135548.2 → XP_014991034.1  phosphatase and actin regulator 1 isoform X4

      UniProtKB/TrEMBL
      G7MQR3
      Related
      ENSMMUP00000026360.4, ENSMMUT00000028174.4
      Conserved Domains (3) summary
      smart00707
      Location:438 → 462
      RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
      pfam02755
      Location:48 → 69
      RPEL; RPEL repeat
      cl29414
      Location:399 → 423
      RPEL; RPEL repeat

    8. XM_015135550.2 → XP_014991036.1  phosphatase and actin regulator 1 isoform X5

      UniProtKB/TrEMBL
      G7MQR3
      Conserved Domains (3) summary
      smart00707
      Location:369 → 393
      RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
      pfam02755
      Location:48 → 69
      RPEL; RPEL repeat
      cl29414
      Location:330 → 354
      RPEL; RPEL repeat

    9. XM_015135538.2 → XP_014991024.2  phosphatase and actin regulator 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QDG8
      Related
      ENSMMUP00000046087.2, ENSMMUT00000067655.2
      Conserved Domains (3) summary
      smart00707
      Location:531 → 555
      RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
      pfam15685
      Location:197 → 312
      GGN; Gametogenetin
      pfam02755
      Location:141 → 162
      RPEL; RPEL repeat
    Nucleotide Protein
    Heading Accession and Version

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