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    PTGES3 prostaglandin E synthase 3 [ Homo sapiens (human) ]

    Gene ID: 10728, updated on 27-Nov-2024

    Summary

    Official Symbol
    PTGES3provided by HGNC
    Official Full Name
    prostaglandin E synthase 3provided by HGNC
    Primary source
    HGNC:HGNC:16049
    See related
    Ensembl:ENSG00000110958 MIM:607061; AllianceGenome:HGNC:16049
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    P23; TEBP; cPGES
    Summary
    This gene encodes an enzyme that converts prostaglandin endoperoxide H2 (PGH2) to prostaglandin E2 (PGE2). This protein functions as a co-chaperone with heat shock protein 90 (HSP90), localizing to response elements in DNA and disrupting transcriptional activation complexes. Alternative splicing results in multiple transcript variants. There are multiple pseudogenes of this gene on several different chromosomes. [provided by RefSeq, Feb 2016]
    Expression
    Ubiquitous expression in ovary (RPKM 50.6), endometrium (RPKM 43.3) and 25 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See PTGES3 in Genome Data Viewer
    Location:
    12q13.3; 12
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (56663349..56688284, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (56631338..56658334, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (57057133..57082068, complement)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:57038866-57039576 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:57039577-57040285 Neighboring gene ATP synthase F1 subunit beta Neighboring gene small nucleolar RNA, C/D box 59B Neighboring gene small nucleolar RNA, C/D box 59A Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6511 Neighboring gene MPRA-validated peak1743 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4563 Neighboring gene RNA, 7SL, cytoplasmic 809, pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:57074705-57075584 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6512 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4564 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6513 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6514 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:57081953-57082478 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6515 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:57083531-57084056 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:57094539-57094693 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6516 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6517 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6518 Neighboring gene nascent polypeptide associated complex subunit alpha Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6519 Neighboring gene DNA primase subunit 1 Neighboring gene Sharpr-MPRA regulatory region 96

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Phenotypes

    EBI GWAS Catalog

    Description
    New gene functions in megakaryopoiesis and platelet formation.
    EBI GWAS Catalog

    HIV-1 interactions

    Replication interactions

    Interaction Pubs
    Knockdown of prostaglandin E synthase 3 (PTGES3) by siRNA inhibits the early stages of HIV-1 replication in 293T cells infected with VSV-G pseudotyped HIV-1 PubMed

    Protein interactions

    Protein Gene Interaction Pubs
    Rev rev HIV-1 Rev interacting protein, prostaglandin E synthase 3 (PTGES3), is identified by the in-vitro binding experiments involving cytosolic or nuclear extracts from HeLa cells PubMed
    Vpu vpu HIV-1 Vpu is identified to have a physical interaction with prostaglandin E synthase 3 (PTGES3; TEBP) in human HEK293 and/or Jurkat cell lines by using affinity tagging and purification mass spectrometry analyses PubMed

    Go to the HIV-1, Human Interaction Database

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables DNA polymerase binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables Hsp90 protein binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables Hsp90 protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables prostaglandin-E synthase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables prostaglandin-E synthase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables prostaglandin-E synthase activity TAS
    Traceable Author Statement
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein-folding chaperone binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables telomerase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables unfolded protein binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in chaperone cofactor-dependent protein refolding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in chaperone-mediated protein complex assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in chaperone-mediated protein complex assembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cyclooxygenase pathway TAS
    Traceable Author Statement
    more info
     
    involved_in fibroblast proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in glycogen biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in lung saccule development IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in nuclear receptor-mediated glucocorticoid signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of telomere maintenance via telomerase IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in prostaglandin biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in prostaglandin biosynthetic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in protein folding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein stabilization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in signal transduction TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in skin development IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in telomerase holoenzyme complex assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in telomerase holoenzyme complex assembly IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in telomere maintenance TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in telomere maintenance via telomerase IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_positive_effect telomere maintenance via telomerase IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in chromosome, telomeric region IC
    Inferred by Curator
    more info
    PubMed 
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytosol TAS
    Traceable Author Statement
    more info
     
    located_in nucleoplasm TAS
    Traceable Author Statement
    more info
     
    located_in nucleus HDA PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of protein folding chaperone complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of protein-containing complex IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    part_of telomerase holoenzyme complex IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    prostaglandin E synthase 3
    Names
    Hsp90 co-chaperone
    cytosolic prostaglandin E synthase
    cytosolic prostaglandin E2 synthase
    progesterone receptor complex p23
    prostaglandin E synthase 3 (cytosolic)
    telomerase-binding protein p23
    unactive progesterone receptor, 23 kD
    NP_001269530.1
    NP_001269531.1
    NP_001269532.1
    NP_001269533.1
    NP_001269534.1
    NP_006592.3
    XP_005268633.1
    XP_006719262.1
    XP_011536075.1
    XP_011536076.1
    XP_016874205.1
    XP_054226794.1
    XP_054226795.1
    XP_054226796.1
    XP_054226797.1
    XP_054226798.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001282601.2NP_001269530.1  prostaglandin E synthase 3 isoform b

      See identical proteins and their annotated locations for NP_001269530.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 3' coding region, compared to variant 1, resulting in an isoform (b) that is shorter than isoform a.
      Source sequence(s)
      AK298147, BC003005, BG927063, BP194632
      Consensus CDS
      CCDS61160.1
      UniProtKB/Swiss-Prot
      Q15185
      Related
      ENSP00000414892.2, ENST00000448157.6
      Conserved Domains (1) summary
      cd00237
      Location:3109
      p23; p23 binds heat shock protein (Hsp)90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis.
    2. NM_001282602.2NP_001269531.1  prostaglandin E synthase 3 isoform c

      See identical proteins and their annotated locations for NP_001269531.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (3) lacks an in-frame exon in the central coding region, compared to variant 1, resulting in an isoform (c) that is shorter than isoform a.
      Source sequence(s)
      AK298160, BC003005, BG927063, BP194632
      Consensus CDS
      CCDS61159.1
      UniProtKB/Swiss-Prot
      Q15185
      Related
      ENSP00000405299.3, ENST00000414274.7
      Conserved Domains (1) summary
      cl00175
      Location:395
      alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.
    3. NM_001282603.2NP_001269532.1  prostaglandin E synthase 3 isoform d

      See identical proteins and their annotated locations for NP_001269532.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (4) lacks an in-frame exon in the central coding region, compared to variant 1, resulting in an isoform (d) that is shorter than isoform a.
      Source sequence(s)
      AK295208, BC003005, BG927063, BP194632
      Consensus CDS
      CCDS61158.1
      UniProtKB/Swiss-Prot
      Q15185
      Related
      ENSP00000402385.2, ENST00000436399.6
      Conserved Domains (1) summary
      cl00175
      Location:376
      alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.
    4. NM_001282604.2NP_001269533.1  prostaglandin E synthase 3 isoform e

      See identical proteins and their annotated locations for NP_001269533.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (5) contains an alternate exon in the 5' region, and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (e) has a distinct and longer N-terminus, compared to isoform a.
      Source sequence(s)
      BC003005, BG927063, BM541503, BP194632
      Consensus CDS
      CCDS73485.1
      UniProtKB/TrEMBL
      A0A087WYT3
      Related
      ENSP00000482075.1, ENST00000614328.4
      Conserved Domains (1) summary
      cd00237
      Location:7113
      p23; p23 binds heat shock protein (Hsp)90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis.
    5. NM_001282605.2NP_001269534.1  prostaglandin E synthase 3 isoform f

      See identical proteins and their annotated locations for NP_001269534.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (6) lacks two alternate in-frame exons, compared to variant 1. The encoded isoform (f) is shorter than isoform a.
      Source sequence(s)
      BC003005, BG927063, BP194632, BU167210
      UniProtKB/Swiss-Prot
      Q15185
      Conserved Domains (1) summary
      cl00175
      Location:395
      alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.
    6. NM_006601.7NP_006592.3  prostaglandin E synthase 3 isoform a

      See identical proteins and their annotated locations for NP_006592.3

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) encodes isoform a.
      Source sequence(s)
      BC003005, BG927063, BP194632
      Consensus CDS
      CCDS31836.1
      UniProtKB/Swiss-Prot
      A8K7D0, B4DHP2, B4DP11, B4DP21, Q15185, Q8WU70
      Related
      ENSP00000262033.6, ENST00000262033.11
      Conserved Domains (1) summary
      cd00237
      Location:3109
      p23; p23 binds heat shock protein (Hsp)90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis.

    RNA

    1. NR_104219.2 RNA Sequence

      Status: REVIEWED

      Description
      Transcript Variant: This variant (7) differs in the 5' terminal exon and uses an alternate splice site in the 3' region, compared to variant 1. This variant is represented as non-coding because uses of the 5' most expected translational start codon would render the transcript a candidate for nonsense-mediated mRNA decay (NMD).
      Source sequence(s)
      AC117378, AK098214, BC003005, BG927063, CA773263, DA556848
      Related
      ENST00000537473.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      56663349..56688284 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006719199.3XP_006719262.1  prostaglandin E synthase 3 isoform X5

      Conserved Domains (1) summary
      cl00175
      Location:799
      alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.
    2. XM_011537774.3XP_011536076.1  prostaglandin E synthase 3 isoform X4

      Conserved Domains (1) summary
      cd00237
      Location:7113
      p23; p23 binds heat shock protein (Hsp)90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis.
    3. XM_005268576.6XP_005268633.1  prostaglandin E synthase 3 isoform X2

      See identical proteins and their annotated locations for XP_005268633.1

      Conserved Domains (1) summary
      cd00237
      Location:7113
      p23; p23 binds heat shock protein (Hsp)90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis.
    4. XM_011537773.3XP_011536075.1  prostaglandin E synthase 3 isoform X3

      See identical proteins and their annotated locations for XP_011536075.1

      Conserved Domains (1) summary
      cd00237
      Location:3109
      p23; p23 binds heat shock protein (Hsp)90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis.
    5. XM_017018716.2XP_016874205.1  prostaglandin E synthase 3 isoform X1

      UniProtKB/TrEMBL
      B3KUY2
      Conserved Domains (1) summary
      cd00237
      Location:7113
      p23; p23 binds heat shock protein (Hsp)90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis.

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060936.1 Alternate T2T-CHM13v2.0

      Range
      56631338..56658334 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054370823.1XP_054226798.1  prostaglandin E synthase 3 isoform X5

    2. XM_054370822.1XP_054226797.1  prostaglandin E synthase 3 isoform X4

    3. XM_054370820.1XP_054226795.1  prostaglandin E synthase 3 isoform X2

    4. XM_054370819.1XP_054226794.1  prostaglandin E synthase 3 isoform X1

      UniProtKB/TrEMBL
      B3KUY2
    5. XM_054370821.1XP_054226796.1  prostaglandin E synthase 3 isoform X3