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    LOC101928201 uncharacterized LOC101928201 [ Homo sapiens (human) ]

    Gene ID: 101928201, updated on 17-Jun-2024

    Summary

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    Gene symbol
    LOC101928201
    Gene description
    uncharacterized LOC101928201
    See related
    Ensembl:ENSG00000236513
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See LOC101928201 in Genome Data Viewer
    Location:
    Xp22.32
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (4627200..4633572, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (4171767..4178139, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (4545241..4551613, complement)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 239 member C Neighboring gene RPL24 pseudogene 9 Neighboring gene NANOG hESC enhancer GRCh37_chrX:4139581-4140146 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:4174729-4175230 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:4175231-4175730 Neighboring gene ReSE screen-validated silencer GRCh37_chrX:4203631-4203806 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:4300102-4300943 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:4393267-4393845 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chrX:4463784-4464983 Neighboring gene MED14-independent group 3 enhancer GRCh37_chrX:4628486-4629685 Neighboring gene NANOG hESC enhancer GRCh37_chrX:4722126-4722632 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:4809466-4809972 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chrX:4872887-4874086 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chrX:4969484-4970683 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:5073162-5073812 Neighboring gene MT-ND6 pseudogene 12 Neighboring gene MT-CYB pseudogene 12

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_110390.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC074035, BC038195
      Related
      ENST00000420725.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      4627200..4633572 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      4171767..4178139 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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