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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_029374.2 RefSeqGene
- Range
-
5000..166616
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001377156.1 → NP_001364085.1 E3 ubiquitin-protein ligase RNF216 isoform b
Status: REVIEWED
- Source sequence(s)
-
AC006483, AC008167
- Consensus CDS
-
CCDS34595.1
- UniProtKB/Swiss-Prot
- Q6Y691, Q75ML7, Q7Z2H7, Q7Z7C1, Q8NHW7, Q9NWF9, Q9NYT1
- UniProtKB/TrEMBL
-
A8K8N1
- Conserved Domains (2) summary
-
- cd16630
Location:513 → 569
- RING-HC_RBR_RNF216; RING finger, HC subclass, found in RING finger protein 216 (RNF216) and similar proteins
- pfam01485
Location:655 → 705
- IBR; IBR domain, a half RING-finger domain
-
NM_207111.4 → NP_996994.1 E3 ubiquitin-protein ligase RNF216 isoform a
See identical proteins and their annotated locations for NP_996994.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1, also known as TRIAD3B) represents the longer transcript and it encodes the longer isoform (a).
- Source sequence(s)
-
AC006483, AC008167
- Consensus CDS
-
CCDS34594.1
- UniProtKB/TrEMBL
-
A8K8N1
- Related
- ENSP00000374552.3, ENST00000389902.8
- Conserved Domains (2) summary
-
- pfam01485
Location:712 → 762
- IBR; IBR domain, a half RING-finger domain
- cd16630
Location:570 → 626
- RING-HC_RBR_RNF216; RING finger, HC subclass, found in RING finger protein 216 (RNF216) and similar proteins
-
NM_207116.3 → NP_996999.1 E3 ubiquitin-protein ligase RNF216 isoform b
See identical proteins and their annotated locations for NP_996999.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2, also known as TRIAD3A) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1. It encodes isoform b which is shorter than isoform a.
- Source sequence(s)
-
AC006483, AC008167
- Consensus CDS
-
CCDS34595.1
- UniProtKB/Swiss-Prot
- Q6Y691, Q75ML7, Q7Z2H7, Q7Z7C1, Q8NHW7, Q9NWF9, Q9NYT1
- UniProtKB/TrEMBL
-
A8K8N1
- Related
- ENSP00000404602.2, ENST00000425013.6
- Conserved Domains (2) summary
-
- cd16630
Location:513 → 569
- RING-HC_RBR_RNF216; RING finger, HC subclass, found in RING finger protein 216 (RNF216) and similar proteins
- pfam01485
Location:655 → 705
- IBR; IBR domain, a half RING-finger domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000007.14 Reference GRCh38.p14 Primary Assembly
- Range
-
5620047..5781663 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047420525.1 → XP_047276481.1 E3 ubiquitin-protein ligase RNF216 isoform X1
- UniProtKB/TrEMBL
-
A8K8N1
-
XM_005249785.3 → XP_005249842.1 E3 ubiquitin-protein ligase RNF216 isoform X1
See identical proteins and their annotated locations for XP_005249842.1
- UniProtKB/TrEMBL
-
A8K8N1
- Conserved Domains (2) summary
-
- pfam01485
Location:712 → 762
- IBR; IBR domain, a half RING-finger domain
- cd16630
Location:570 → 626
- RING-HC_RBR_RNF216; RING finger, HC subclass, found in RING finger protein 216 (RNF216) and similar proteins
-
XM_047420524.1 → XP_047276480.1 E3 ubiquitin-protein ligase RNF216 isoform X1
- UniProtKB/TrEMBL
-
A8K8N1
-
XM_047420526.1 → XP_047276482.1 E3 ubiquitin-protein ligase RNF216 isoform X2
- UniProtKB/Swiss-Prot
- Q6Y691, Q75ML7, Q7Z2H7, Q7Z7C1, Q8NHW7, Q9NWF9, Q9NYT1
- UniProtKB/TrEMBL
-
A8K8N1
-
XM_047420529.1 → XP_047276485.1 E3 ubiquitin-protein ligase RNF216 isoform X5
- UniProtKB/TrEMBL
-
B2RAT1
-
XM_047420528.1 → XP_047276484.1 E3 ubiquitin-protein ligase RNF216 isoform X4
-
XM_047420527.1 → XP_047276483.1 E3 ubiquitin-protein ligase RNF216 isoform X3
Alternate T2T-CHM13v2.0
Genomic
-
NC_060931.1 Alternate T2T-CHM13v2.0
- Range
-
5737579..5899098 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054358493.1 → XP_054214468.1 E3 ubiquitin-protein ligase RNF216 isoform X1
- UniProtKB/TrEMBL
-
A8K8N1
-
XM_054358495.1 → XP_054214470.1 E3 ubiquitin-protein ligase RNF216 isoform X1
- UniProtKB/TrEMBL
-
A8K8N1
-
XM_054358494.1 → XP_054214469.1 E3 ubiquitin-protein ligase RNF216 isoform X1
- UniProtKB/TrEMBL
-
A8K8N1
-
XM_054358492.1 → XP_054214467.1 E3 ubiquitin-protein ligase RNF216 isoform X1
- UniProtKB/TrEMBL
-
A8K8N1
-
XM_054358496.1 → XP_054214471.1 E3 ubiquitin-protein ligase RNF216 isoform X2
- UniProtKB/Swiss-Prot
- Q6Y691, Q75ML7, Q7Z2H7, Q7Z7C1, Q8NHW7, Q9NWF9, Q9NYT1
- UniProtKB/TrEMBL
-
A8K8N1
-
XM_054358499.1 → XP_054214474.1 E3 ubiquitin-protein ligase RNF216 isoform X5
- UniProtKB/TrEMBL
-
B2RAT1
-
XM_054358498.1 → XP_054214473.1 E3 ubiquitin-protein ligase RNF216 isoform X4
-
XM_054358497.1 → XP_054214472.1 E3 ubiquitin-protein ligase RNF216 isoform X3
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_019011.4: Suppressed sequence
- Description
- NM_019011.4: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.