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    2010003K11Rik RIKEN cDNA 2010003K11 gene [ Mus musculus (house mouse) ]

    Gene ID: 69861, updated on 2-Nov-2024

    Summary

    Official Symbol
    2010003K11Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 2010003K11 geneprovided by MGI
    Primary source
    MGI:MGI:1917111
    See related
    Ensembl:ENSMUSG00000042041 AllianceGenome:MGI:1917111
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Faci; Nrnp1
    Summary
    Orthologous to human C11orf86 (chromosome 11 open reading frame 86). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in duodenum adult (RPKM 60.8), small intestine adult (RPKM 42.2) and 7 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See 2010003K11Rik in Genome Data Viewer
    Location:
    19 A; 19 4.07 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (4546816..4548611, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (4496788..4498583, complement)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_45348 Neighboring gene RIKEN cDNA A930001C03 gene Neighboring gene STARR-seq mESC enhancer starr_45349 Neighboring gene ras homolog family member D Neighboring gene synaptotagmin XII Neighboring gene STARR-positive B cell enhancer ABC_E778 Neighboring gene pyruvate carboxylase Neighboring gene STARR-seq mESC enhancer starr_45350 Neighboring gene leucine rich repeat and fibronectin type III domain containing 4 Neighboring gene microRNA 6986 Neighboring gene Ras converting CAAX endopeptidase 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein C11orf86 homolog
    Names
    nutritionally regulated nuclear protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_027237.2NP_081513.1  uncharacterized protein C11orf86 homolog

      See identical proteins and their annotated locations for NP_081513.1

      Status: VALIDATED

      Source sequence(s)
      AC124347
      Consensus CDS
      CCDS29429.1
      UniProtKB/Swiss-Prot
      Q8VC23, Q9D8F7
      UniProtKB/TrEMBL
      A0A678XUL2
      Related
      ENSMUSP00000036729.7, ENSMUST00000048482.8
      Conserved Domains (1) summary
      pfam15464
      Location:1115
      DUF4633; Domain of unknown function (DUF4633)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      4546816..4548611 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)