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    4930405D11Rik RIKEN cDNA 4930405D11 gene [ Mus musculus (house mouse) ]

    Gene ID: 73922, updated on 22-Oct-2024

    Summary

    Official Symbol
    4930405D11Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 4930405D11 geneprovided by MGI
    Primary source
    MGI:MGI:1921172
    See related
    Ensembl:ENSMUSG00000085940 AllianceGenome:MGI:1921172
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in placenta adult (RPKM 4.6) and testis adult (RPKM 4.1) See more
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    Genomic context

    See 4930405D11Rik in Genome Data Viewer
    Location:
    11 D; 11 56.1 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (90695517..90785978)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (90804691..90895152)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 34938 Neighboring gene predicted gene, 22762 Neighboring gene STARR-seq mESC enhancer starr_30416 Neighboring gene STARR-seq mESC enhancer starr_30417 Neighboring gene STARR-seq mESC enhancer starr_30418 Neighboring gene chaperonin containing Tcp1, subunit 3 (gamma) pseudogene Neighboring gene STARR-seq mESC enhancer starr_30419 Neighboring gene STARR-seq mESC enhancer starr_30420 Neighboring gene STARR-seq mESC enhancer starr_30422 Neighboring gene STARR-seq mESC enhancer starr_30425 Neighboring gene STARR-seq mESC enhancer starr_30426 Neighboring gene STARR-seq mESC enhancer starr_30427 Neighboring gene predicted gene, 38950 Neighboring gene kinesin family member 2B

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_045956.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK147079, AL691476
      Related
      ENSMUST00000142521.2
    2. NR_168485.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL691476
      Related
      ENSMUST00000370166.1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      90695517..90785978
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)