U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Mylk3 myosin light chain kinase 3 [ Mus musculus (house mouse) ]

    Gene ID: 213435, updated on 28-Oct-2024

    Summary

    Official Symbol
    Mylk3provided by MGI
    Official Full Name
    myosin light chain kinase 3provided by MGI
    Primary source
    MGI:MGI:2443063
    See related
    Ensembl:ENSMUSG00000031698 AllianceGenome:MGI:2443063
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    MLCK; D830007F02Rik
    Summary
    Enables calcium/calmodulin-dependent protein kinase activity and myosin light chain kinase activity. Involved in protein phosphorylation and sarcomere organization. Located in cytoplasm. Colocalizes with actin cytoskeleton. Is expressed in heart atrium; heart ventricle; inner ear; and liver. Orthologous to human MYLK3 (myosin light chain kinase 3). [provided by Alliance of Genome Resources, Oct 2024]
    Expression
    Biased expression in heart adult (RPKM 54.9), liver E14 (RPKM 12.4) and 2 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Mylk3 in Genome Data Viewer
    Location:
    8 C3; 8 41.61 cM
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (86050933..86112969, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (85324928..85386340, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E9120 Neighboring gene origin recognition complex, subunit 6 Neighboring gene predicted gene, 22336 Neighboring gene RIKEN cDNA 4921524J17 gene Neighboring gene STARR-positive B cell enhancer ABC_E3790 Neighboring gene STARR-positive B cell enhancer ABC_E11392 Neighboring gene predicted gene, 53446

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Markers

    Clone Names

    • MGC169607

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in cardiac myofibril assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cardiac myofibril assembly IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cardiac myofibril assembly ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to interleukin-1 IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cellular response to interleukin-1 ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of sarcomere organization IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of sarcomere organization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein phosphorylation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of vascular permeability involved in acute inflammatory response IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of vascular permeability involved in acute inflammatory response ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in sarcomere organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in sarcomere organization IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in sarcomere organization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in sarcomerogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in sarcomerogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    colocalizes_with actin cytoskeleton IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    colocalizes_with actin cytoskeleton IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    myosin light chain kinase 3
    Names
    cardiac MLCK
    cardiac-MyBP-C-associated Ca/CaM kinase
    cardiac-specific myosin light chain kinase
    putative myosin light chain kinase 3
    NP_001284541.1
    NP_780650.2
    XP_006530888.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001297612.1NP_001284541.1  myosin light chain kinase 3 isoform 2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate first exon compared to variant 1. The resulting isoform (2) has a shorter and distinct N-terminus compared to isoform 1.
      Source sequence(s)
      AK146683, AK165216, BB843262
      Consensus CDS
      CCDS80910.1
      UniProtKB/TrEMBL
      D3Z630
      Related
      ENSMUSP00000113389.2, ENSMUST00000122452.8
      Conserved Domains (2) summary
      smart00220
      Location:361613
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cd14192
      Location:353613
      STKc_MLCK3; Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 3
    2. NM_175441.5NP_780650.2  myosin light chain kinase 3 isoform 1

      See identical proteins and their annotated locations for NP_780650.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
      Source sequence(s)
      AC134854
      Consensus CDS
      CCDS40422.1
      UniProtKB/Swiss-Prot
      B0LY41, Q3UIZ8, Q3V3V0, Q8BWD1
      UniProtKB/TrEMBL
      B2RQL6
      Related
      ENSMUSP00000034133.8, ENSMUST00000034133.14
      Conserved Domains (2) summary
      smart00220
      Location:494746
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cd14192
      Location:486746
      STKc_MLCK3; Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      86050933..86112969 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006530825.4XP_006530888.1  myosin light chain kinase 3 isoform X1

      Conserved Domains (1) summary
      cd14192
      Location:326586
      STKc_MLCK3; Catalytic domain of the Serine/Threonine Kinase, Myosin Light Chain Kinase 3