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    NDE1 nudE neurodevelopment protein 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 508088, updated on 4-Oct-2024

    Summary

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    Official Symbol
    NDE1provided by VGNC
    Official Full Name
    nudE neurodevelopment protein 1provided by VGNC
    Primary source
    VGNC:VGNC:31932
    See related
    BGD:BT23001; Ensembl:ENSBTAG00000015986
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See NDE1 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 25 NC_037352.1 (14084545..14144218)

    Chromosome 25 - NC_037352.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112444307 Neighboring gene meiosis regulator and mRNA stability factor 1 Neighboring gene microRNA mir-484 Neighboring gene myosin heavy chain 11 Neighboring gene centrosomal protein 20 Neighboring gene rho-related GTP-binding protein RhoA-B-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037352.1 Chromosome 25 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in centrosome localization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chromosome segregation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment of chromosome localization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment of mitotic spindle orientation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in microtubule nucleation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic centrosome separation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle transport along microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of kinesin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in kinetochore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear distribution protein nudE homolog 1
    Names
    nuclear distribution gene E homolog 1
    nudE nuclear distribution gene E homolog 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001100321.1 → NP_001093791.1  nuclear distribution protein nudE homolog 1

      See identical proteins and their annotated locations for NP_001093791.1

      Status: PROVISIONAL

      Source sequence(s)
      BC148068
      UniProtKB/TrEMBL
      A0AAA9STZ3, A6QLS4
      Related
      ENSBTAP00000021265.5, ENSBTAT00000021265.6
      Conserved Domains (2) summary
      pfam04880
      Location:134 → 305
      NUDE_C; NUDE protein, C-terminal conserved region
      cl25732
      Location:27 → 186
      SMC_N; RecF/RecN/SMC N terminal domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037352.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      14084545..14144218
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005224719.5 → XP_005224776.1  nuclear distribution protein nudE homolog 1 isoform X1

      See identical proteins and their annotated locations for XP_005224776.1

      UniProtKB/TrEMBL
      A0AAA9STZ3
      Conserved Domains (3) summary
      PRK14160
      Location:1 → 188
      PRK14160; heat shock protein GrpE; Provisional
      pfam04880
      Location:134 → 305
      NUDE_C; NUDE protein, C-terminal conserved region
      cl03075
      Location:9 → 127
      GrpE; nucleotide exchange factor GrpE

    2. XM_005224718.5 → XP_005224775.1  nuclear distribution protein nudE homolog 1 isoform X1

      See identical proteins and their annotated locations for XP_005224775.1

      UniProtKB/TrEMBL
      A0AAA9STZ3
      Conserved Domains (3) summary
      PRK14160
      Location:1 → 188
      PRK14160; heat shock protein GrpE; Provisional
      pfam04880
      Location:134 → 305
      NUDE_C; NUDE protein, C-terminal conserved region
      cl03075
      Location:9 → 127
      GrpE; nucleotide exchange factor GrpE

    3. XM_005224720.5 → XP_005224777.1  nuclear distribution protein nudE homolog 1 isoform X2

      See identical proteins and their annotated locations for XP_005224777.1

      UniProtKB/TrEMBL
      A0AAA9STZ3, A6QLS4
      Conserved Domains (2) summary
      pfam04880
      Location:134 → 305
      NUDE_C; NUDE protein, C-terminal conserved region
      cl25732
      Location:27 → 186
      SMC_N; RecF/RecN/SMC N terminal domain

    4. XM_005224722.5 → XP_005224779.1  nuclear distribution protein nudE homolog 1 isoform X4

      UniProtKB/TrEMBL
      A0AAA9STZ3
      Related
      ENSBTAP00000064711.2, ENSBTAT00000077996.2
      Conserved Domains (2) summary
      pfam04880
      Location:134 → 305
      NUDE_C; NUDE protein, C-terminal conserved region
      cl25732
      Location:27 → 186
      SMC_N; RecF/RecN/SMC N terminal domain

    5. XM_005224721.5 → XP_005224778.1  nuclear distribution protein nudE homolog 1 isoform X3

      UniProtKB/TrEMBL
      A0AAA9STZ3
      Conserved Domains (2) summary
      pfam04880
      Location:134 → 305
      NUDE_C; NUDE protein, C-terminal conserved region
      cl25732
      Location:27 → 186
      SMC_N; RecF/RecN/SMC N terminal domain
    Nucleotide Protein Strain
    Heading Accession and Version

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