U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    LOC105375084 uncharacterized LOC105375084 [ Homo sapiens (human) ]

    Gene ID: 105375084, updated on 17-Sep-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC105375084
    Gene description
    uncharacterized LOC105375084
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC105375084 in Genome Data Viewer
    Location:
    6p12.3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (50797933..50802848)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901479 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:50533627-50533787 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:50674460-50674961 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:50675081-50675582 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:50675583-50676082 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr6:50682973-50683503 Neighboring gene VISTA enhancer hs865 Neighboring gene Sharpr-MPRA regulatory region 1859 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr6:50691426-50692118 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:50692119-50692809 Neighboring gene transcription factor AP-2 delta Neighboring gene MPRA-validated peak5845 silencer Neighboring gene uncharacterized LOC124901490 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:50791385-50791912 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:50791978-50792107 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:50793064-50793564 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:50793565-50794065 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:50810267-50810772 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:50816733-50817234 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:50817235-50817734 Neighboring gene transcription factor AP-2 beta Neighboring gene ribosomal protein S17 pseudogene 5

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000006.12 Chromosome 6 Reference GRCh38.p14 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    Phenotypes

    Go to the top of the page Help

    Review eQTL and phenotype association data in this region using PheGenI

    Variation

    Go to the top of the page Help

    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      50797933..50802848
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_926867.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials