U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    BWT86_gp1 hypothetical protein [ Shahe picorna-like virus 13 ]

    Gene ID: 30854163, updated on 17-Aug-2018

    Summary

    Go to the top of the page Help
    Gene symbol
    BWT86_gp1
    Gene description
    hypothetical protein
    Locus tag
    BWT86_gp1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Shahe picorna-like virus 13 (strain: SHWC13556, nat-host: freshwater arthropod)
    Lineage
    Viruses; unclassified RNA viruses
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_032894.1 (951..8936)

    NC_032894.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_032894.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Redefining the invertebrate RNA virosphere. Shi M, et al. Nature, 2016 Dec 22. PMID 27880757

    GeneRIFs: Gene References Into Functions

    General protein information

    Go to the top of the page Help
    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_032894.1 Reference assembly

      Range
      951..8936
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009336810.1 hypothetical protein [Shahe picorna-like virus 13]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1L3KJB0
      Conserved Domains (4) summary
      cd00205
      Location:438 → 585
      rhv_like; Picornavirus capsid protein domain_like. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids composed of 60 copies each of 4 virus encoded proteins; alignment includes picornaviridae, like poliovirus, hepatitis A ...
      pfam00910
      Location:1398 → 1500
      RNA_helicase; RNA helicase
      cl02808
      Location:2125 → 2607
      RT_like; RT_like: Reverse transcriptase (RT, RNA-dependent DNA polymerase)_like family. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, ...
      cl13999
      Location:92 → 289
      rhv_like; Picornavirus capsid protein domain_like. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids composed of 60 copies each of 4 virus encoded proteins; alignment includes picornaviridae, like poliovirus, hepatitis A ...
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.