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    Rep replication associated protein [ Sida yellow vein China alphasatellite ]

    Gene ID: 18388466, updated on 18-Aug-2023

    Summary

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    Gene symbol
    Rep
    Gene description
    replication associated protein
    Locus tag
    BU33_gp1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Sida yellow vein China alphasatellite (nat-host: tomato)
    Lineage
    Viruses; Satellites; Satellite Nucleic Acids; Single stranded DNA satellites; Alphasatellites; Begomovirus-associated alphasatellites; unclassified Begomovirus-associated alphasatellites
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    Genomic context

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    Location:
    clone: J25.16
    Sequence:
    NC_023484.1 (79..1026)

    NC_023484.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_023484.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Association of an alphasatellite with tomato yellow leaf curl virus and ageratum yellow vein virus in Japan is suggestive of a recent introduction. Shahid MS, et al. Viruses, 2014 Jan 14. PMID 24424499, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    replication associated protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_023484.1 Reference assembly

      Range
      79..1026
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009002582.1 replication associated protein [Sida yellow vein China alphasatellite]

      See identical proteins and their annotated locations for YP_009002582.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      M1LCF7, W5RUQ1
      Conserved Domains (2) summary
      pfam00910
      Location:182 → 277
      RNA_helicase; RNA helicase
      pfam02407
      Location:9 → 94
      Viral_Rep; Putative viral replication protein
    Nucleotide Protein
    Heading Accession and Version

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