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    CYL32_sL1gp1 core shell protein [ Piscine orthoreovirus ]

    Gene ID: 35199816, updated on 18-Aug-2023

    Summary

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    Gene symbol
    CYL32_sL1gp1
    Gene description
    core shell protein
    Locus tag
    CYL32_sL1gp1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Piscine orthoreovirus (isolate: CGA280-05, nat-host: Atlantic salmon)
    Lineage
    Viruses; dsRNA viruses; Reoviridae; Spinareovirinae; Orthoreovirus
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    Genomic context

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    Location:
    segment: L1
    Sequence:
    NC_036476.1 (19..3867)

    NC_036476.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_036476.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Whole-genome analysis of piscine reovirus (PRV) shows PRV represents a new genus in family Reoviridae and its genome segment S1 sequences group it into two separate sub-genotypes. Kibenge MJ, et al. Virol J, 2013 Jul 11. PMID 23844948, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    core shell protein
    YP_009445962.1
    • lambda1 protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_036476.1 Reference assembly

      Range
      19..3867
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009445962.1 core shell protein [Piscine orthoreovirus]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0G2YLQ2, S5MMM0
      Conserved Domains (1) summary
      cd11674
      Location:123 → 1270
      lambda-1; inner capsid protein lambda-1 or VP3
    Nucleotide Protein
    Heading Accession and Version

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