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    para-Rep3 satellite replication initiator protein [ Pea necrotic yellow dwarf alphasatellite 3 ]

    Gene ID: 37619711, updated on 18-Aug-2023

    Summary

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    Gene symbol
    para-Rep3
    Gene description
    satellite replication initiator protein
    Locus tag
    D1T62_gp1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pea necrotic yellow dwarf alphasatellite 3 (isolate: Gross-Enzersdorf_1, acronym: PNYDV-[AT;1], nat-host: Pisum sativum)
    Lineage
    Viruses; Satellites; Satellite Nucleic Acids; Single stranded DNA satellites; Alphasatellites; Babu- and nanovirus-associated alphasatellites; unclassified Babu- and nanovirus-associated alphasatellites
    Also known as
    sat-Rep3
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    Genomic context

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    Sequence:
    NC_038959.1 (1..1000)

    NC_038959.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_038959.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Miscellaneous features

    • Loc: 994-1000, 1-2 conserved nonanucleotide at replication origin

    regulatory

    • Loc: 874-879 regulatory_class = polyA_signal_sequence
    • Loc: 973-979 regulatory_class = TATA_box

    stem_loop

    • Loc: 980-1000, 1-14

    General protein information

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    Preferred Names
    satellite replication initiator protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_038959.1 Reference assembly

      Range
      1..1000
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009508292.1 satellite replication initiator protein [Pea necrotic yellow dwarf alphasatellite 3]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2R4FYR6, V9TQK1
      Conserved Domains (2) summary
      pfam00910
      Location:170 → 267
      RNA_helicase; RNA helicase
      pfam02407
      Location:6 → 85
      Viral_Rep; Putative viral replication protein
    Nucleotide Protein
    Heading Accession and Version

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