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    LOC4339221 19 kDa globulin-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4339221, updated on 16-Jul-2024

    Summary

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    Gene symbol
    LOC4339221
    Gene description
    19 kDa globulin-like
    Locus tag
    OSNPB_050499100
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OsJ_19079; OJ1057_B02.5
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    Genomic context

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    See LOC4339221 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (24691936..24692769, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (24576937..24577744, complement)

    Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136351205 Neighboring gene uncharacterized LOC136356457 Neighboring gene uncharacterized LOC4339219 Neighboring gene probable serine/threonine-protein kinase PBL7 Neighboring gene vignain-like Neighboring gene peroxidase 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Nucleotide sequence of an abundant rice seed globulin: homology with the high molecular weight glutelins of wheat, rye and triticale. Krishnan HB, et al. Biochem Biophys Res Commun, 1993 May 28. PMID 8503935
    2. A novel cereal storage protein: molecular genetics of the 19 kDa globulin of rice. Shorrosh BS, et al. Plant Mol Biol, 1992 Jan. PMID 1731968
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nutrient reservoir activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    19 kDa globulin
    Names
    26 kDa globulin
    LOC_Os05g41970
    P0010D04.16
    alpha-globulin
    alpha-glubulin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001402582.1 → NP_001389511.1  19 kDa globulin precursor

      Status: VALIDATED

      Source sequence(s)
      AU094622, AU163853, CI457774, CI688421
      UniProtKB/Swiss-Prot
      P29835, P93414, Q0DH05
      UniProtKB/TrEMBL
      A2Y665

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

      Range
      24691936..24692769 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P29835.2 GenPept UniProtKB/Swiss-Prot:P29835

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