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    proca1 protein interacting with cyclin A1 [ Pimephales promelas (fathead minnow) ]

    Gene ID: 120478751, updated on 18-Sep-2024

    Summary

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    Gene symbol
    proca1
    Gene description
    protein interacting with cyclin A1
    Locus tag
    F2P79_010513
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pimephales promelas
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Leuciscidae; Pogonichthyinae; Pimephales
    Orthologs
    zebrafish all
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    Genomic context

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    See proca1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current EPA_FHM_2.0 (GCF_016745375.1) Unplaced Scaffold NW_024121166.1 (3302174..3305437, complement)

    NW_024121166.1Genomic Context describing neighboring genes Neighboring gene dehydrogenase/reductase SDR family member 11-like Neighboring gene dehydrogenase/reductase SDR family member 11-like Neighboring gene RAB34, member RAS oncogene family a Neighboring gene transfer RNA threonine (anticodon AGU) Neighboring gene NIMA-related kinase 8

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024121166 Unplaced Scaffold Reference EPA_FHM_2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phospholipase A2 activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in arachidonate secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in phospholipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein proca1
    Names
    group 3 secretory phospholipase A2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pimephales promelas Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EPA_FHM_2.0 Primary Assembly

    Genomic

    1. NW_024121166.1 Reference EPA_FHM_2.0 Primary Assembly

      Range
      3302174..3305437 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039670859.1 → XP_039526793.1  uncharacterized protein proca1

      Conserved Domains (1) summary
      cd04704
      Location:192 → 288
      PLA2_bee_venom_like; A sub-family of Phospholipase A2, similar to bee venom PLA2. PLA2 is a super-family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent. Enzymatically active PLA2 cleaves the sn-2 position of the glycerol backbone of ...
    Nucleotide Protein
    Heading Accession and Version

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