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    LOC120784187 Krueppel-like factor 10 [ Xiphias gladius (swordfish) ]

    Gene ID: 120784187, updated on 8-May-2024

    Summary

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    Gene symbol
    LOC120784187
    Gene description
    Krueppel-like factor 10
    See related
    EnsemblRapid:ENSXGLG00000005429
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xiphias gladius
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Istiophoriformes; Xiphiidae; Xiphias
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    Genomic context

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    See LOC120784187 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current ASM1685928v1 (GCF_016859285.1) 22 NC_053421.1 (5905198..5908517)

    Chromosome 22 - NC_053421.1Genomic Context describing neighboring genes Neighboring gene protein LYRIC-like Neighboring gene ubiquitin protein ligase E3 component n-recognin 5 Neighboring gene antizyme inhibitor 1-like Neighboring gene V-type proton ATPase subunit C 1-A-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_053421.1 Chromosome 22 Reference ASM1685928v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Krueppel-like factor 10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xiphias gladius Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1685928v1 Primary Assembly

    Genomic

    1. NC_053421.1 Reference ASM1685928v1 Primary Assembly

      Range
      5905198..5908517
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040117736.1 → XP_039973670.1  Krueppel-like factor 10 isoform X2

      Conserved Domains (2) summary
      COG5048
      Location:368 → 421
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:359 → 378
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_040117735.1 → XP_039973669.1  Krueppel-like factor 10 isoform X2

      Conserved Domains (2) summary
      COG5048
      Location:368 → 421
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:359 → 378
      ZF_C2H2; C2H2 Zn finger [structural motif]

    3. XM_040117734.1 → XP_039973668.1  Krueppel-like factor 10 isoform X1

      Conserved Domains (2) summary
      COG5048
      Location:391 → 444
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:382 → 401
      ZF_C2H2; C2H2 Zn finger [structural motif]

    4. XM_040117733.1 → XP_039973667.1  Krueppel-like factor 10 isoform X1

      Related
      ENSXGLP00000015004.1, ENSXGLT00000015453.1
      Conserved Domains (2) summary
      COG5048
      Location:391 → 444
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:382 → 401
      ZF_C2H2; C2H2 Zn finger [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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