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    TAVs1gp1 1a protein [ Tomato aspermy virus ]

    Gene ID: 962652, updated on 18-Aug-2023

    Summary

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    Gene symbol
    TAVs1gp1
    Gene description
    1a protein
    Locus tag
    TAVs1gp1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Tomato aspermy virus (strain: V)
    Lineage
    Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae; Cucumovirus
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    Genomic context

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    Location:
    segment: RNA 1
    Sequence:
    NC_003837.1 (95..3076)

    NC_003837.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003837.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolutionary relationships in the cucumoviruses: nucleotide sequence of tomato aspermy virus RNA 1. Bernal JJ, et al. J Gen Virol, 1991 Sep. PMID 1895056

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    1a protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003837.1 Reference assembly

      Range
      95..3076
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_620760.1 1a protein [Tomato aspermy virus]

      See identical proteins and their annotated locations for NP_620760.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P28931
      UniProtKB/TrEMBL
      A0A8F2JGP1
      Conserved Domains (4) summary
      pfam01443
      Location:711 → 975
      Viral_helicase1; Viral (Superfamily 1) RNA helicase
      pfam01660
      Location:49 → 406
      Vmethyltransf; Viral methyltransferase
      pfam12467
      Location:447 → 610
      CMV_1a; Cucumber mosaic virus 1a protein family
      pfam12503
      Location:613 → 699
      CMV_1a_C; Cucumber mosaic virus 1a protein C terminal
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P28931.1

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