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    LOC116655870 selenoprotein F [ Drosophila ananassae ]

    Gene ID: 116655870, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC116655870
    Gene description
    selenoprotein F
    Locus tag
    Dana_GF13902
    See related
    EnsemblRapid:LOC116655870
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila ananassae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GF13902; GF13902-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC116655870 in Genome Data Viewer
    Location:
    chromosome: 2R
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    102 current ASM1763931v2 (GCF_017639315.1) 2R NC_057928.1 (12622970..12632712, complement)
    101 previous assembly DanaRS2.1 (GCF_003285975.2) Unplaced Scaffold NW_022473439.1 (14425762..14428655)

    Chromosome 2R - NC_057928.1Genomic Context describing neighboring genes Neighboring gene cellular communication network factor protein Ccn Neighboring gene phospholipid-transporting ATPase ABCA3 Neighboring gene uncharacterized LOC6493414 Neighboring gene CREB-regulated transcription coactivator Neighboring gene protein spitz Neighboring gene Nedd4 family interacting protein Neighboring gene Protein on ecdysone puffs

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum lumen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    selenoprotein F; uncharacterized protein LOC116655870
    Names
    Dana\GF13902
    Dana\GF13902-PA
    dana_GLEANR_14002

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila ananassae Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1763931v2

    Genomic

    1. NC_057928.1 Reference ASM1763931v2

      Range
      12622970..12632712 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044714782.1 → XP_044570717.1  selenoprotein F isoform X5

      Related
      XP_044570717.1, XM_044714782.1

    2. XM_044714779.1 → XP_044570714.1  uncharacterized protein LOC116655870 isoform X1

      UniProtKB/TrEMBL
      B3M4T2
      Related
      XP_044570714.1, XM_044714779.1

    3. XM_044714780.1 → XP_044570715.1  uncharacterized protein LOC116655870 isoform X3

      UniProtKB/TrEMBL
      B3M154
      Related
      XP_044570715.1, XM_044714780.1

    4. XM_032454619.2 → XP_032310510.1  uncharacterized protein LOC116655870 isoform X2

      UniProtKB/TrEMBL
      B3M4T2
      Related
      XP_032310510.1, XM_032454619.2

    5. XM_032454618.2 → XP_032310509.1  uncharacterized protein LOC116655870 isoform X1

      UniProtKB/TrEMBL
      B3M4T2
      Related
      XP_032310509.1, XM_032454618.2

    6. XM_032454620.2 → XP_032310511.1  uncharacterized protein LOC116655870 isoform X3

      UniProtKB/TrEMBL
      B3M154
      Related
      XP_032310511.1, XM_032454620.2

    7. XM_044714781.1 → XP_044570716.1  selenoprotein F isoform X4

      UniProtKB/TrEMBL
      B3N2M8
      Related
      XP_044570716.1, XM_044714781.1
      Conserved Domains (1) summary
      pfam08806
      Location:74 → 148
      Sep15_SelM; Sep15/SelM redox domain
    Nucleotide Protein Strain
    Heading Accession and Version

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