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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_051604.2 RefSeqGene
- Range
-
5435..69117
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001318219.1 → NP_001305148.1 centrosome-associated protein CEP250 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) contains a distinct 5' UTR and lacks an in-frame portion of the 5' coding region, compared to variant 1. The resulting isoform (2) has a shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AF049105, AW083819, BC144706, FO393401
- UniProtKB/Swiss-Prot
-
Q9BV73
- Conserved Domains (1) summary
-
- TIGR02168
Location:158 → 920
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
-
NM_007186.6 → NP_009117.2 centrosome-associated protein CEP250 isoform 1
See identical proteins and their annotated locations for NP_009117.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
FO393401
- Consensus CDS
-
CCDS13255.1
- UniProtKB/Swiss-Prot
- E1P5Q3, O14812, O60588, Q9BV73, Q9H450
- UniProtKB/TrEMBL
-
A0A9L9PXX3
- Related
- ENSP00000380661.1, ENST00000397527.6
- Conserved Domains (4) summary
-
- COG1196
Location:252 → 1057
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:790 → 1552
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- TIGR04376
Location:604 → 709
- TIGR04376; TIGR04376 family protein
- pfam15035
Location:40 → 215
- Rootletin; Ciliary rootlet component, centrosome cohesion
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000020.11 Reference GRCh38.p14 Primary Assembly
- Range
-
35455165..35519280
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006723691.2 → XP_006723754.1 centrosome-associated protein CEP250 isoform X1
See identical proteins and their annotated locations for XP_006723754.1
- UniProtKB/Swiss-Prot
- E1P5Q3, O14812, O60588, Q9BV73, Q9H450
- UniProtKB/TrEMBL
-
A0A9L9PXX3
- Conserved Domains (4) summary
-
- COG1196
Location:252 → 1057
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:790 → 1552
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- TIGR04376
Location:604 → 709
- TIGR04376; TIGR04376 family protein
- pfam15035
Location:40 → 215
- Rootletin; Ciliary rootlet component, centrosome cohesion
-
XM_047439854.1 → XP_047295810.1 centrosome-associated protein CEP250 isoform X2
-
XM_005260262.5 → XP_005260319.1 centrosome-associated protein CEP250 isoform X1
See identical proteins and their annotated locations for XP_005260319.1
- UniProtKB/Swiss-Prot
- E1P5Q3, O14812, O60588, Q9BV73, Q9H450
- UniProtKB/TrEMBL
-
A0A9L9PXX3
- Conserved Domains (4) summary
-
- COG1196
Location:252 → 1057
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:790 → 1552
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- TIGR04376
Location:604 → 709
- TIGR04376; TIGR04376 family protein
- pfam15035
Location:40 → 215
- Rootletin; Ciliary rootlet component, centrosome cohesion
-
XM_005260264.5 → XP_005260321.1 centrosome-associated protein CEP250 isoform X4
- UniProtKB/TrEMBL
-
A0A9L9PXX3
- Conserved Domains (3) summary
-
- COG1196
Location:241 → 980
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:713 → 1475
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam15035
Location:40 → 215
- Rootletin; Ciliary rootlet component, centrosome cohesion
-
XM_047439862.1 → XP_047295818.1 centrosome-associated protein CEP250 isoform X7
-
XM_006723692.5 → XP_006723755.1 centrosome-associated protein CEP250 isoform X1
See identical proteins and their annotated locations for XP_006723755.1
- UniProtKB/Swiss-Prot
- E1P5Q3, O14812, O60588, Q9BV73, Q9H450
- UniProtKB/TrEMBL
-
A0A9L9PXX3
- Conserved Domains (4) summary
-
- COG1196
Location:252 → 1057
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:790 → 1552
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- TIGR04376
Location:604 → 709
- TIGR04376; TIGR04376 family protein
- pfam15035
Location:40 → 215
- Rootletin; Ciliary rootlet component, centrosome cohesion
-
XM_047439859.1 → XP_047295815.1 centrosome-associated protein CEP250 isoform X4
-
XM_006723690.5 → XP_006723753.1 centrosome-associated protein CEP250 isoform X1
See identical proteins and their annotated locations for XP_006723753.1
- UniProtKB/Swiss-Prot
- E1P5Q3, O14812, O60588, Q9BV73, Q9H450
- UniProtKB/TrEMBL
-
A0A9L9PXX3
- Conserved Domains (4) summary
-
- COG1196
Location:252 → 1057
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:790 → 1552
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- TIGR04376
Location:604 → 709
- TIGR04376; TIGR04376 family protein
- pfam15035
Location:40 → 215
- Rootletin; Ciliary rootlet component, centrosome cohesion
-
XM_047439853.1 → XP_047295809.1 centrosome-associated protein CEP250 isoform X2
-
XM_047439857.1 → XP_047295813.1 centrosome-associated protein CEP250 isoform X4
-
XM_006723693.5 → XP_006723756.1 centrosome-associated protein CEP250 isoform X1
See identical proteins and their annotated locations for XP_006723756.1
- UniProtKB/Swiss-Prot
- E1P5Q3, O14812, O60588, Q9BV73, Q9H450
- UniProtKB/TrEMBL
-
A0A9L9PXX3
- Conserved Domains (4) summary
-
- COG1196
Location:252 → 1057
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:790 → 1552
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- TIGR04376
Location:604 → 709
- TIGR04376; TIGR04376 family protein
- pfam15035
Location:40 → 215
- Rootletin; Ciliary rootlet component, centrosome cohesion
-
XM_047439860.1 → XP_047295816.1 centrosome-associated protein CEP250 isoform X4
-
XM_005260263.5 → XP_005260320.1 centrosome-associated protein CEP250 isoform X3
- UniProtKB/TrEMBL
-
A0A9L9PXZ7
- Conserved Domains (4) summary
-
- COG1196
Location:252 → 1057
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:790 → 1552
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- TIGR04376
Location:604 → 709
- TIGR04376; TIGR04376 family protein
- pfam15035
Location:40 → 215
- Rootletin; Ciliary rootlet component, centrosome cohesion
-
XM_047439863.1 → XP_047295819.1 centrosome-associated protein CEP250 isoform X9
-
XM_017027617.2 → XP_016883106.1 centrosome-associated protein CEP250 isoform X6
- UniProtKB/TrEMBL
- A0A9L9PXD2, A0A9L9PXZ7
- Related
- ENSP00000516578.1, ENST00000706830.1
-
XM_047439856.1 → XP_047295812.1 centrosome-associated protein CEP250 isoform X3
-
XM_047439861.1 → XP_047295817.1 centrosome-associated protein CEP250 isoform X5
-
XM_047439864.1 → XP_047295820.1 centrosome-associated protein CEP250 isoform X13
-
XM_047439858.1 → XP_047295814.1 centrosome-associated protein CEP250 isoform X4
-
XM_047439855.1 → XP_047295811.1 centrosome-associated protein CEP250 isoform X3
- Related
- ENSP00000516577.1, ENST00000706829.1
-
XM_011528518.4 → XP_011526820.1 centrosome-associated protein CEP250 isoform X8
- UniProtKB/TrEMBL
-
A0A9L9PXX3
- Conserved Domains (4) summary
-
- COG1196
Location:129 → 934
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:667 → 1429
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- TIGR04376
Location:481 → 586
- TIGR04376; TIGR04376 family protein
- pfam15035
Location:1 → 92
- Rootletin; Ciliary rootlet component, centrosome cohesion
-
XM_011528519.3 → XP_011526821.1 centrosome-associated protein CEP250 isoform X10
- UniProtKB/TrEMBL
-
A0A9L9PXX3
- Conserved Domains (3) summary
-
- COG1196
Location:50 → 855
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- TIGR02168
Location:588 → 1350
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- TIGR04376
Location:402 → 507
- TIGR04376; TIGR04376 family protein
-
XM_017027618.2 → XP_016883107.1 centrosome-associated protein CEP250 isoform X11
- UniProtKB/TrEMBL
-
A0A9L9PXX3
-
XM_017027619.2 → XP_016883108.1 centrosome-associated protein CEP250 isoform X12
Alternate T2T-CHM13v2.0
Genomic
-
NC_060944.1 Alternate T2T-CHM13v2.0
- Range
-
37175894..37240174
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054322887.1 → XP_054178862.1 centrosome-associated protein CEP250 isoform X1
- UniProtKB/Swiss-Prot
- E1P5Q3, O14812, O60588, Q9BV73, Q9H450
-
XM_054322894.1 → XP_054178869.1 centrosome-associated protein CEP250 isoform X3
-
XM_054322906.1 → XP_054178881.1 centrosome-associated protein CEP250 isoform X9
-
XM_054322903.1 → XP_054178878.1 centrosome-associated protein CEP250 isoform X6
- UniProtKB/TrEMBL
-
A0A9L9PXD2
-
XM_054322910.1 → XP_054178885.1 centrosome-associated protein CEP250 isoform X13
-
XM_054322901.1 → XP_054178876.1 centrosome-associated protein CEP250 isoform X4
-
XM_054322891.1 → XP_054178866.1 centrosome-associated protein CEP250 isoform X1
- UniProtKB/Swiss-Prot
- E1P5Q3, O14812, O60588, Q9BV73, Q9H450
-
XM_054322890.1 → XP_054178865.1 centrosome-associated protein CEP250 isoform X1
- UniProtKB/Swiss-Prot
- E1P5Q3, O14812, O60588, Q9BV73, Q9H450
-
XM_054322902.1 → XP_054178877.1 centrosome-associated protein CEP250 isoform X5
-
XM_054322892.1 → XP_054178867.1 centrosome-associated protein CEP250 isoform X2
-
XM_054322897.1 → XP_054178872.1 centrosome-associated protein CEP250 isoform X4
-
XM_054322904.1 → XP_054178879.1 centrosome-associated protein CEP250 isoform X7
-
XM_054322896.1 → XP_054178871.1 centrosome-associated protein CEP250 isoform X3
-
XM_054322899.1 → XP_054178874.1 centrosome-associated protein CEP250 isoform X4
-
XM_054322889.1 → XP_054178864.1 centrosome-associated protein CEP250 isoform X1
- UniProtKB/Swiss-Prot
- E1P5Q3, O14812, O60588, Q9BV73, Q9H450
-
XM_054322900.1 → XP_054178875.1 centrosome-associated protein CEP250 isoform X4
-
XM_054322888.1 → XP_054178863.1 centrosome-associated protein CEP250 isoform X1
- UniProtKB/Swiss-Prot
- E1P5Q3, O14812, O60588, Q9BV73, Q9H450
-
XM_054322893.1 → XP_054178868.1 centrosome-associated protein CEP250 isoform X2
-
XM_054322895.1 → XP_054178870.1 centrosome-associated protein CEP250 isoform X3
-
XM_054322898.1 → XP_054178873.1 centrosome-associated protein CEP250 isoform X4
-
XM_054322905.1 → XP_054178880.1 centrosome-associated protein CEP250 isoform X8
-
XM_054322907.1 → XP_054178882.1 centrosome-associated protein CEP250 isoform X10
-
XM_054322908.1 → XP_054178883.1 centrosome-associated protein CEP250 isoform X11
-
XM_054322909.1 → XP_054178884.1 centrosome-associated protein CEP250 isoform X12
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001035518.1: Suppressed sequence
- Description
- NM_001035518.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.