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    LOC4350061 uncharacterized LOC4350061 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4350061, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4350061
    Gene description
    uncharacterized LOC4350061
    Locus tag
    OSNPB_110212300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4350061 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 11 NC_089045.1 (5892118..5898418, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 11 NC_029266.1 (5835240..5846957, complement)

    Chromosome 11 - NC_089045.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107279423 Neighboring gene putative disease resistance protein RGA1 Neighboring gene uncharacterized LOC4350062 Neighboring gene uncharacterized LOC4350063

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4350061
    Names
    Os11g0212300
    protein kinase domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089045.1 Reference ASM3414082v1 Primary Assembly

      Range
      5892118..5898418 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015760981.3 → XP_015616467.1  uncharacterized protein LOC4350061 isoform X2

      UniProtKB/TrEMBL
      Q2R8X9
      Conserved Domains (3) summary
      sd00039
      Location:471 → 509
      7WD40; WD40 repeat [structural motif]
      cl21453
      Location:24 → 303
      PKc_like; Protein Kinases, catalytic domain
      cl29593
      Location:429 → 646
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    2. XM_015760979.3 → XP_015616465.1  uncharacterized protein LOC4350061 isoform X2

      UniProtKB/TrEMBL
      Q2R8X9
      Conserved Domains (3) summary
      sd00039
      Location:471 → 509
      7WD40; WD40 repeat [structural motif]
      cl21453
      Location:24 → 303
      PKc_like; Protein Kinases, catalytic domain
      cl29593
      Location:429 → 646
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    3. XM_015760976.3 → XP_015616462.1  uncharacterized protein LOC4350061 isoform X2

      UniProtKB/TrEMBL
      Q2R8X9
      Conserved Domains (3) summary
      sd00039
      Location:471 → 509
      7WD40; WD40 repeat [structural motif]
      cl21453
      Location:24 → 303
      PKc_like; Protein Kinases, catalytic domain
      cl29593
      Location:429 → 646
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    4. XM_066305478.1 → XP_066161575.1  uncharacterized protein LOC4350061 isoform X1

    5. XM_066305479.1 → XP_066161576.1  uncharacterized protein LOC4350061 isoform X2

    Nucleotide Protein
    Heading Accession and Version

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