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    Vom1r97 vomeronasal 1 receptor 97 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 286956, updated on 17-Aug-2024

    Summary

    Symbol
    Vom1r97provided by RGD
    Full Name
    vomeronasal 1 receptor 97provided by RGD
    Primary source
    RGD:708391
    See related
    EnsemblRapid:ENSRNOG00000068663 AllianceGenome:RGD:708391
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Vn5; Vnr5; V1rb9; V1rb12; Vmn1r41
    Summary
    Predicted to enable pheromone receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and response to pheromone. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human VN1R17P (vomeronasal 1 receptor 17 pseudogene). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    See Vom1r97 in Genome Data Viewer
    Location:
    4q34
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (123919092..123921263)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (122361863..122364034)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (121898248..121900419)

    Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor pseudogene 77 Neighboring gene vomeronasal 1 receptor 96 Neighboring gene vomeronasal 1 receptor pseudogene 78 Neighboring gene vomeronasal 1 receptor 98

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables pheromone receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to pheromone IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in sensory perception of chemical stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    vomeronasal type-1 receptor 97
    Names
    pheromone receptor VN5
    putative pheromone receptor VN5
    vomernasal 1 receptor Vom1r97
    vomeronasal 1 receptor, B9
    vomeronasal V1r-type receptor V1rb12
    vomeronasal receptor 5
    vomeronasal type-1 receptor 41
    vomeronasal type-1 receptor B12
    vomeronasal type-1 receptor B9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_173297.3NP_775419.2  vomeronasal type-1 receptor 97

      See identical proteins and their annotated locations for NP_775419.2

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000004
      UniProtKB/Swiss-Prot
      Q5J3M9, Q62854
      UniProtKB/TrEMBL
      A6IB69
      Related
      ENSRNOP00000097028.1, ENSRNOT00000116872.2
      Conserved Domains (1) summary
      pfam03402
      Location:39302
      V1R; Vomeronasal organ pheromone receptor family, V1R

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086022.1 Reference GRCr8

      Range
      123919092..123921263
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)