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    LOC105373757 uncharacterized LOC105373757 [ Homo sapiens (human) ]

    Gene ID: 105373757, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC105373757
    Gene description
    uncharacterized LOC105373757
    See related
    Ensembl:ENSG00000227098
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 1.6) See more
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    Genomic context

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    See LOC105373757 in Genome Data Viewer
    Location:
    2q31.1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (176830842..176849403, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (177312966..177331529, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (177695570..177714131, complement)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene alpha-L-fucosidase 1 pseudogene 1 Neighboring gene ribosomal protein L29 pseudogene 8 Neighboring gene uncharacterized LOC105373756 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:177778427-177778597 Neighboring gene RNA, U6 small nuclear 187, pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    Genotypes

    General gene information

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    Clone Names

    • AC073636.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_187986.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC073636

    2. NR_187987.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC073636
      Related
      ENST00000659978.1

    3. NR_187988.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC073636
      Related
      ENST00000661910.1

    4. NR_187989.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC073636
      Related
      ENST00000665208.1

    5. NR_187990.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC073636

    6. NR_187991.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC073636

    7. NR_187992.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC073636
      Related
      ENST00000661320.1

    8. NR_187993.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC073636

    9. NR_187994.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC073636
      Related
      ENST00000661615.1

    10. NR_187995.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC073636
      Related
      ENST00000457756.2

    11. NR_187996.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC073636, AC092162
      Related
      ENST00000653543.1

    12. NR_187997.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC073636, AC092162
      Related
      ENST00000655213.1

    13. NR_187998.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC073636, AC092162

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      176830842..176849403 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      177312966..177331529 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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