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    LOC105369995 uncharacterized LOC105369995 [ Homo sapiens (human) ]

    Gene ID: 105369995, updated on 17-Sep-2024

    Summary

    Gene symbol
    LOC105369995
    Gene description
    uncharacterized LOC105369995
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 2.7) See more
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    Genomic context

    See LOC105369995 in Genome Data Viewer
    Location:
    12q24.21
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (114077118..114113490)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (114053789..114090160)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (114514923..114551295)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105369993 Neighboring gene CRE2 enhancer downstream of TBX5 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:114501919-114502507 Neighboring gene uncharacterized LOC105369994 Neighboring gene HAUS augmin like complex subunit 8 pseudogene 1 Neighboring gene glutamate-ammonia ligase pseudogene 5 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_24844 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_24865 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr12:114601036-114602235 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:114676508-114676718 Neighboring gene Sharpr-MPRA regulatory region 11920 Neighboring gene long intergenic non-protein coding RNA 2459 Neighboring gene CRE9 enhancer downstream of TBX5 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:114723717-114724462 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:114739578-114740104 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:114740105-114740631 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr12:114773645-114774145 Neighboring gene T-box transcription factor 5 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:114843151-114843837 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:114843876-114844376 Neighboring gene TBX5 antisense RNA 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_188422.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010183
    2. NR_188423.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010183
    3. NR_188424.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010183
    4. NR_188425.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010183

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      114077118..114113490
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060936.1 Alternate T2T-CHM13v2.0

      Range
      114053789..114090160
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)