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    LOC105373438 uncharacterized LOC105373438 [ Homo sapiens (human) ]

    Gene ID: 105373438, updated on 17-Sep-2024

    Summary

    Gene symbol
    LOC105373438
    Gene description
    uncharacterized LOC105373438
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward prostate (RPKM 1.2) See more
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    Genomic context

    See LOC105373438 in Genome Data Viewer
    Location:
    2p24.3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (13537914..13758396)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (13567819..13788257)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (13678039..13898521)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105373437 Neighboring gene NANOG hESC enhancer GRCh37_chr2:13652552-13653084 Neighboring gene uncharacterized LOC105373485 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:13662708-13663907 Neighboring gene NANOG hESC enhancer GRCh37_chr2:13679270-13679771 Neighboring gene uncharacterized LOC124907736 Neighboring gene NACA pseudogene 9 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:13816299-13817207 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:13962357-13963239 Neighboring gene uncharacterized LOC107985854 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_52900 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_52953 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_52989 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_52999 Neighboring gene NANOG hESC enhancer GRCh37_chr2:14337206-14337732 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:14371872-14372508 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:14372509-14373144 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:14394929-14395543 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:14395544-14396157 Neighboring gene long intergenic non-protein coding RNA 276 Neighboring gene RNA, U6 small nuclear 1288, pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_188380.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC016730, AC073062, AC092635
    2. NR_188381.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC016730, AC073062, AC092635
    3. NR_188382.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC016730, AC073062, AC092635
    4. NR_188383.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC016730, AC073062, AC092635
    5. NR_188384.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC016730, AC073062, AC092635

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      13537914..13758396
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      13567819..13788257
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)