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    LOC112937446 uncharacterized LOC112937446 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 112937446, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC112937446
    Gene description
    uncharacterized LOC112937446
    Locus tag
    OSNPB_120133600
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC112937446 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 12 NC_089046.1 (1675370..1676739, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 12 NC_029267.1 (1650848..1652266, complement)

    Chromosome 12 - NC_089046.1Genomic Context describing neighboring genes Neighboring gene L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase Neighboring gene calcium-dependent protein kinase 26-like Neighboring gene uncharacterized LOC4351431 Neighboring gene probable auxin efflux carrier component 1d

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized LOC112937446
    Names
    Os12g0133600

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001428234.1 → NP_001415163.1  uncharacterized LOC112937446

      Status: VALIDATED

      Source sequence(s)
      AK103096
      UniProtKB/TrEMBL
      A0A8J8Y1L0, A2ZB69, A3C8E9, Q0IQA7, Q2QY36

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089046.1 Reference ASM3414082v1 Primary Assembly

      Range
      1675370..1676739 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026022184.2 → XP_025877969.1  uncharacterized LOC112937446 isoform X1

    2. XM_026022185.2 → XP_025877970.1  uncharacterized LOC112937446 isoform X2

    3. XM_026022187.2 → XP_025877972.1  uncharacterized LOC112937446 isoform X3

      UniProtKB/TrEMBL
      A0A8J8Y1L0, A2ZB69, A3C8E9, Q0IQA7, Q2QY36

    RNA

    1. XR_003240066.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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