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    DDB_G0271664 EXS domain-containing protein [ Dictyostelium discoideum AX4 ]

    Gene ID: 8617997, updated on 17-May-2024

    Summary

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    Gene symbol
    DDB_G0271664
    Gene description
    EXS domain-containing protein
    Primary source
    dictyBase:DDB_G0271664
    Locus tag
    DDB_G0271664
    See related
    AmoebaDB:DDB_G0271664; VEuPathDB:DDB_G0271664
    Gene type
    protein coding
    RNA name
    SPX domain-containing protein
    RefSeq status
    PROVISIONAL
    Organism
    Dictyostelium discoideum AX4 (strain: AX4)
    Lineage
    Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
    Old locus tag
    DDBDRAFT_0216857; DDBDRAFT_0220588; DDBDRAFT_0266489; DDB_0216857; DDB_0220588; DDB_0266489
    NEW
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_007088.5 (442827..445598)

    Chromosome 2 - NC_007088.5Genomic Context describing neighboring genes Neighboring gene CLC 6/7 family protein Neighboring gene leucine-rich repeat-containing protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_007088.5

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of Dictyostelium discoideum. Glöckner G, et al. Nature, 2002 Jul 4. PMID 12097910
    2. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by dictyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Names
    EXS domain-containing protein
    SPX domain-containing protein
    SPX/EXS domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_007088.5 Reference assembly

      Range
      442827..445598
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002649146.1 → XP_002649192.1  SPX domain-containing protein [Dictyostelium discoideum AX4]

      See identical proteins and their annotated locations for XP_002649192.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      C7FZX7, Q55B06, Q55B07
      Conserved Domains (4) summary
      cd14447
      Location:225 → 314
      SPX; Domain found in Syg1, Pho81, XPR1, and related proteins
      cl21499
      Location:2 → 30
      SPX; Domain found in Syg1, Pho81, XPR1, and related proteins
      pfam03105
      Location:229 → 321
      SPX; SPX domain
      pfam03124
      Location:421 → 759
      EXS; EXS family
    Nucleotide Protein
    Heading Accession and Version

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