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    LOC107279822 putative 12-oxophytodienoate reductase 13 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 107279822, updated on 14-Jul-2024

    Summary

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    Gene symbol
    LOC107279822
    Gene description
    putative 12-oxophytodienoate reductase 13
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OPR9; OPR13; OsOPR13; OsJ_14925
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    Genomic context

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    See LOC107279822 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (22592175..22597891, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) Unplaced Scaffold NW_015379198.1 (6007..11696, complement)

    Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene putative 12-oxophytodienoate reductase 11 Neighboring gene putative 12-oxophytodienoate reductase 12 Neighboring gene protein BEARSKIN2-like Neighboring gene chaperonin 60 subunit beta 4, chloroplastic

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables FMN binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative 12-oxophytodienoate reductase 13
    Names
    COX assembly mitochondrial protein 2 homolog
    OPDA-reductase 13
    NP_001415232.1
    XP_066165236.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001428303.1 → NP_001415232.1  putative 12-oxophytodienoate reductase 13

      Status: PROVISIONAL

      Source sequence(s)
      AK067218, CI138750
      UniProtKB/Swiss-Prot
      A0A0P0WAZ6, B9FFD3

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

      Range
      22592175..22597891 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066309139.1 → XP_066165236.1  putative 12-oxophytodienoate reductase 13 isoform X1

    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B9FFD3.1 GenPept UniProtKB/Swiss-Prot:B9FFD3

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