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    LOC4325948 uncharacterized LOC4325948 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4325948, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4325948
    Gene description
    uncharacterized LOC4325948
    Locus tag
    OSNPB_010595400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4325948 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (23907633..23911703)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (23333001..23337247)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene protein SODIUM POTASSIUM ROOT DEFECTIVE 3 Neighboring gene uncharacterized LOC4326390 Neighboring gene probable esterase KAI2 Neighboring gene F-box/FBD/LRR-repeat protein At1g13570

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4325948
    Names
    B1103C09.17
    Os01g0595400
    P0451D05.30

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      23907633..23911703
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015794640.3 → XP_015650126.1  uncharacterized protein LOC4325948

      UniProtKB/TrEMBL
      A0A0P0V4T0, A2WS41, A2ZV06, Q7F5A9, Q8L4C8
      Conserved Domains (1) summary
      pfam04398
      Location:42 → 148
      DUF538; Protein of unknown function, DUF538

    2. XM_015794635.3 → XP_015650121.1  uncharacterized protein LOC4325948

      UniProtKB/TrEMBL
      A0A0P0V4T0, A2WS41, A2ZV06, Q7F5A9, Q8L4C8
      Conserved Domains (1) summary
      pfam04398
      Location:42 → 148
      DUF538; Protein of unknown function, DUF538
    Nucleotide Protein
    Heading Accession and Version

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