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    LOC4331585 ABC transporter C family member 13-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4331585, updated on 17-Jul-2024

    Summary

    Gene symbol
    LOC4331585
    Gene description
    ABC transporter C family member 13-like
    Locus tag
    OSNPB_030142800
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    LPA2; ABCC13; OsMRP5; OsMRP13; OsABCC13
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    Genomic context

    See LOC4331585 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (2376686..2383344)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (2367836..2374429)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase WAV3 Neighboring gene transcription factor WER Neighboring gene uncharacterized LOC4331586 Neighboring gene uncharacterized LOC4331587

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    ABC transporter C family member 13
    Names
    LOC_Os03g04920
    Multidrug resistance-associated protein 13
    Protein LOW PHYTIC ACID 2
    NP_001404120.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001417191.1NP_001404120.1  ABC transporter C family member 13

      Status: VALIDATED

      Source sequence(s)
      AK064325, AK121451, AP014959, AU165414, BT131433, CA999359, CI245482, CI309419, D22347
      UniProtKB/Swiss-Prot
      A0A0P0VSW0, A2XCD4, Q10RX7

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      2376686..2383344
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)