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    LOC130369635 2'-deoxymugineic-acid 2'-dioxygenase [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 130369635, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC130369635
    Gene description
    2'-deoxymugineic-acid 2'-dioxygenase
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC130369635 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (3759820..3761727)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene wall-associated receptor kinase 5-like Neighboring gene zinc finger A20 and AN1 domain-containing stress-associated protein 10 Neighboring gene Gibberellin 20 oxidase 3 Neighboring gene probable CCR4-associated factor 1 homolog 11

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_089041.1 Chromosome 7 Reference ASM3414082v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    2'-deoxymugineic-acid 2'-dioxygenase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001421998.1 → NP_001408927.1  2'-deoxymugineic-acid 2'-dioxygenase

      Status: VALIDATED

      Source sequence(s)
      AK060318
      UniProtKB/TrEMBL
      B8BPQ8, Q0D8C3, Q69LD9

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      3759820..3761727
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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