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    LOC9270480 non-specific lipid transfer protein GPI-anchored 2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9270480, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC9270480
    Gene description
    non-specific lipid transfer protein GPI-anchored 2
    Locus tag
    OSNPB_010814100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC9270480 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (35233274..35236900)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (34626131..34628445)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4327594 Neighboring gene uncharacterized LOC125752050 Neighboring gene type I inositol polyphosphate 5-phosphatase 10 Neighboring gene putative pentatricopeptide repeat-containing protein At5g40405 Neighboring gene uncharacterized serine-rich protein C215.13

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    non-specific lipid transfer protein GPI-anchored 2
    Names
    OSJNBa0085D07.22
    Os01g0814100
    P0432B10.23
    protease inhibitor-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      35233274..35236900
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066304904.1 → XP_066161001.1  non-specific lipid transfer protein GPI-anchored 2 isoform X2

    2. XM_015766934.3 → XP_015622420.1  non-specific lipid transfer protein GPI-anchored 2 isoform X1

      UniProtKB/TrEMBL
      A2WWB0, A2ZYX7, Q8RZK6
      Conserved Domains (1) summary
      cd00010
      Location:52 → 116
      AAI_LTSS; Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins. ...
    Nucleotide Protein
    Heading Accession and Version

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