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    LOC4347241 uncharacterized LOC4347241 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4347241, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4347241
    Gene description
    uncharacterized LOC4347241
    Locus tag
    OSNPB_090453700
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4347241 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 9 NC_089043.1 (21397493..21404984, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (17016785..17024428, complement)

    Chromosome 9 - NC_089043.1Genomic Context describing neighboring genes Neighboring gene thylakoidal processing peptidase 1, chloroplastic Neighboring gene nuclear pore complex protein NUP58 Neighboring gene zinc finger A20 and AN1 domain-containing stress-associated protein 12-like Neighboring gene uncharacterized LOC4347242 Neighboring gene phosphatidylinositol 4-phosphate 5-kinase 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4347241
    Names
    Os09g0453700
    P0488D02.26
    dipeptidyl aminopeptidase BI
    putative oligopeptidase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089043.1 Reference ASM3414082v1 Primary Assembly

      Range
      21397493..21404984 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015756329.2 → XP_015611815.1  uncharacterized protein LOC4347241

      UniProtKB/TrEMBL
      Q67UZ1
      Conserved Domains (1) summary
      COG1770
      Location:47 → 780
      PtrB; Protease II [Amino acid transport and metabolism]

    RNA

    1. XR_001539942.2 RNA Sequence

    2. XR_001539941.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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