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    LOC4352433 uncharacterized LOC4352433 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4352433, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4352433
    Gene description
    uncharacterized LOC4352433
    Locus tag
    OSNPB_120540700
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4352433 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 12 NC_089046.1 (22301562..22304108)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 12 NC_029267.1 (21614786..21617528)

    Chromosome 12 - NC_089046.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9270455 Neighboring gene uncharacterized LOC9269082 Neighboring gene acyl-CoA-binding domain-containing protein 6-like Neighboring gene tryptophan--tRNA ligase, cytoplasmic

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4352433
    Names
    Os12g0540700

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089046.1 Reference ASM3414082v1 Primary Assembly

      Range
      22301562..22304108
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015763056.3 → XP_015618542.1  uncharacterized protein LOC4352433 isoform X1

      UniProtKB/TrEMBL
      B9GDK1, Q2QP65
      Conserved Domains (1) summary
      pfam06784
      Location:68 → 177
      UPF0240; Uncharacterized protein family (UPF0240)

    2. XM_015763057.3 → XP_015618543.1  uncharacterized protein LOC4352433 isoform X2

      UniProtKB/TrEMBL
      A0A0P0YB51, Q2QP64
      Conserved Domains (1) summary
      pfam06784
      Location:49 → 172
      UPF0240; uncharacterized protein family (UPF0240)
    Nucleotide Protein
    Heading Accession and Version

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