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    LOC4341806 ent-isokaurene C2/C3-hydroxylase-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4341806, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4341806
    Gene description
    ent-isokaurene C2/C3-hydroxylase-like
    Locus tag
    OSNPB_060671300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4341806 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (28710235..28713992, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (27844583..27848517, complement)

    Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene probable potassium transporter 13 Neighboring gene auxin-responsive protein SAUR71 Neighboring gene auxin-responsive protein SAUR50 Neighboring gene twinkle homolog protein, chloroplastic/mitochondrial

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ent-isokaurene C2/C3-hydroxylase-like
    Names
    OSJNBa0032M14.8
    Os06g0671300
    P0485A07.18
    putative cytochrome P450

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

      Range
      28710235..28713992 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015786512.3 → XP_015641998.1  ent-isokaurene C2/C3-hydroxylase-like

      UniProtKB/TrEMBL
      A2YG25, Q652J2
      Conserved Domains (2) summary
      PHA03307
      Location:52 → 109
      PHA03307; transcriptional regulator ICP4; Provisional
      cl41757
      Location:88 → 530
      cytochrome_P450; cytochrome P450 (CYP) superfamily
    Nucleotide Protein
    Heading Accession and Version

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