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    TLR5 toll like receptor 5 [ Apteryx mantelli (North Island brown kiwi) ]

    Gene ID: 106497929, updated on 28-Aug-2024

    Summary

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    Gene symbol
    TLR5
    Gene description
    toll like receptor 5
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apteryx mantelli
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
    Orthologs
    human mouse all
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    Genomic context

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    See TLR5 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current bAptMan1.hap1 (GCF_036417845.1) 3 NC_089980.1 (22680951..22685084, complement)

    Chromosome 3 - NC_089980.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106498274 Neighboring gene dispatched RND transporter family member 1 Neighboring gene uncharacterized LOC106498022 Neighboring gene sushi domain containing 4 Neighboring gene calpain-8-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_089980.1 Chromosome 3 Reference bAptMan1.hap1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in inflammatory response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in toll-like receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    toll-like receptor 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036417845.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bAptMan1.hap1

    Genomic

    1. NC_089980.1 Reference bAptMan1.hap1

      Range
      22680951..22685084 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_067294677.1 → XP_067150778.1  toll-like receptor 5

    Nucleotide Protein
    Heading Accession and Version

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